The LabelHash Server

1adyA motif

Motif residues: GLU81 THR83 ARG112 GLU130 TYR264 ARG311

Table of Top 100 matches

Click here for a compact table with the top 100 matches.
The images below show the motif residues and the match residues superimposed. The carbon atoms are white in the motif and green in the match. Other atoms in the motif and match are colored by element. The C-alphas are shown as spheres, while the remaining motif and match atoms are shown in stick representation. The rest of the matching protein is shown in ribbon representation.

Downloads

Top 20 matches

For each match you can click on the "[pdb]" link to download a PDB file with the matching chain aligned with the motif.

1.  1adjA [pdb]

LRMSD: 0.137
p-value: 1.65e-05
Matching residues: GLU81 THR83 ARG112 GLU130 TYR264 ARG311
EC class: 6.1.1.21
Biological process: translation, tRNA aminoacylation for protein translation, histidyl-tRNA aminoacylation
Cellular Component: cytoplasm
Molecular function: nucleotide binding, aminoacyl-tRNA ligase activity, histidine-tRNA ligase activity, ATP binding, ligase activity



3.  3o53B [pdb]

LRMSD: 0.795
p-value: 9.36e-05
Matching residues: SER89 LEU101 THR106 ASP108 GLU124 ASN152
EC class: 0.0.0.0
Molecular function: protein binding


4.  2q09A [pdb]

LRMSD: 0.899
p-value: 0.000162
Matching residues: ARG38 GLN57 GLU133 THR136 LEU165 ASP374
EC class: 0.0.0.0
Biological process: histidine metabolic process, histidine catabolic process to glutamate and formamide
Cellular Component: cytoplasm
Molecular function: hydrolase activity, hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds


5.  3p24A [pdb]

LRMSD: 0.915
p-value: 0.000188
Matching residues: SER42 ASP47 THR50 ASP54 ASN70 LEU105
EC class: 0.0.0.0
Biological process: proteolysis
Cellular Component: extracellular matrix
Molecular function: metalloendopeptidase activity, peptidase activity, metallopeptidase activity, zinc ion binding



7.  3netB [pdb]

LRMSD: 0.939
p-value: 0.000219
Matching residues: ASP98 THR100 ARG128 ASP146 TYR302 ARG350
EC class: 6.1.1.21
Biological process: translation, tRNA aminoacylation for protein translation, histidyl-tRNA aminoacylation
Cellular Component: cytoplasm
Molecular function: nucleotide binding, aminoacyl-tRNA ligase activity, histidine-tRNA ligase activity, ATP binding, ligase activity


8.  3lkdB [pdb]

LRMSD: 0.957
p-value: 0.000241
Matching residues: SER232 GLU255 ASN277 THR285 ASP289 LEU340
EC class: 0.0.0.0
Biological process: DNA methylation, methylation
Molecular function: nucleic acid binding, DNA binding, methyltransferase activity, N-methyltransferase activity, site-specific DNA-methyltransferase (adenine-specific) activity, transferase activity


9.  3d8bB [pdb]

LRMSD: 0.992
p-value: 0.000304
Matching residues: SER464 ASP500 GLN527 THR545 GLU550 LEU563
EC class: 0.0.0.0
Biological process: ATP metabolic process
Molecular function: nucleotide binding, magnesium ion binding, ATP binding, hydrolase activity, nucleoside-triphosphatase activity, metal ion binding


10.  2pt3A [pdb]

LRMSD: 1.03
p-value: 0.000396
Matching residues: LEU269 ARG360 ASP393 ASP555 THR557 ASN570
EC class: 1.11.1.7
Biological process: response to oxidative stress, defense response to bacterium, hydrogen peroxide catabolic process, oxidation-reduction process
Cellular Component: extracellular region, extracellular space
Molecular function: peroxidase activity, oxidoreductase activity, heme binding, metal ion binding


11.  3db9A [pdb]

LRMSD: 1.05
p-value: 0.000455
Matching residues: ARG24 ASP72 THR77 LEU80 ASP85 ARG94
EC class: 0.0.0.0


12.  3k2xA [pdb]

LRMSD: 1.05
p-value: 0.000455
Matching residues: ARG80 ASP97 THR99 LEU107 ARG128 GLU149
EC class: 4.6.1.12
Biological process: isoprenoid biosynthetic process, terpenoid biosynthetic process
Molecular function: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity, lyase activity, metal ion binding



14.  3norA [pdb]

LRMSD: 1.07
p-value: 0.000504
Matching residues: ASP20 THR22 ASP26 LEU38 SER105 ARG145
EC class: 0.0.0.0


15.  1yz6A [pdb]

LRMSD: 1.09
p-value: 0.000593
Matching residues: ARG201 ASP211 ARG225 ASP227 THR229 TYR234
EC class: 0.0.0.0
Biological process: translation
Cellular Component: eukaryotic translation initiation factor 2 complex
Molecular function: RNA binding, translation initiation factor activity


16.  1yz7A [pdb]

LRMSD: 1.1
p-value: 0.000665
Matching residues: ARG201 ASP211 ARG225 ASP227 THR229 TYR234
EC class: 0.0.0.0
Biological process: translation
Cellular Component: eukaryotic translation initiation factor 2 complex
Molecular function: RNA binding, translation initiation factor activity



18.  3hazA [pdb]

LRMSD: 1.12
p-value: 0.000748
Matching residues: ARG356 ARG522 LEU593 THR601 ASP603 ASP823
EC class: 0.0.0.0
Biological process: glutamate biosynthetic process, proline biosynthetic process, proline catabolic process, metabolic process, oxidation-reduction process
Molecular function: 1-pyrroline-5-carboxylate dehydrogenase activity, proline dehydrogenase activity, oxidoreductase activity



20.  1dbiA [pdb]

LRMSD: 1.13
p-value: 0.000791
Matching residues: GLU34 GLU83 THR97 ARG103 SER126 LEU235
EC class: 0.0.0.0
Biological process: proteolysis
Cellular Component: extracellular region
Molecular function: serine-type endopeptidase activity, peptidase activity, serine-type peptidase activity, hydrolase activity, metal ion binding