The LabelHash Server
1aylA motif
Motif residues: LEU249 SER250 GLY251 GLY253 LYS254 THR255
Table of Top 100 matches
Click here for a compact table with the top 100 matches.The images below show the motif residues and the match residues superimposed. The carbon atoms are white in the motif and green in the match. Other atoms in the motif and match are colored by element. The C-alphas are shown as spheres, while the remaining motif and match atoms are shown in stick representation. The rest of the matching protein is shown in ribbon representation.
Downloads
- A zip file with PDB files for the top 100 matches and the motif itself.
- An XML file with all matches. You can open this file in Chimera with our ViewMatch plugin.
Top 20 matches
For each match you can click on the "[pdb]" link to download a PDB file with the matching chain aligned with the motif.1. 1k3dA [pdb]
LRMSD: 0.0910597369075p-value: 2.39617584157e-05
Matching residues: LEU249 SER250 GLY251 GLY253 LYS254 THR255
EC class: 4.1.1.49
GO terms:
Molecular function: carboxy-lyase activity, lyase activity, ATP binding, calcium ion binding, catalytic activity, nucleotide binding, phosphoenolpyruvate carboxykinase (ATP) activity, purine nucleotide binding, phosphoenolpyruvate carboxykinase activity
Biological process: gluconeogenesis
Cellular component: cytoplasm
2. 1xkvA [pdb]
LRMSD: 0.296007722616p-value: 8.27034891699e-05
Matching residues: LEU233 SER234 GLY235 GLY237 LYS238 THR239
EC class: 4.1.1.49
GO terms:
Molecular function: calcium ion binding, metal ion binding, carboxy-lyase activity, lyase activity, ATP binding, nucleotide binding, phosphoenolpyruvate carboxykinase (ATP) activity, purine nucleotide binding, phosphoenolpyruvate carboxykinase activity
Biological process: gluconeogenesis
Cellular component: cytoplasm
3. 2ax4B [pdb]
LRMSD: 0.393306881189p-value: 0.000131496519316
Matching residues: LEU60 SER61 GLY62 GLY64 LYS65 THR66
EC class: 2.7.7.4, 2.7.1.25
GO terms:
Molecular function: nucleotidyltransferase activity, sulfate adenylyltransferase (ATP) activity, transferase activity, kinase activity, ATP binding, catalytic activity, nucleotide binding, adenylylsulfate kinase activity, transferase activity, transferring phosphorus-containing groups, protein binding
Biological process: skeletal system development, sulfate assimilation, blood coagulation
4. 1ii2B [pdb]
LRMSD: 0.456972002983p-value: 0.000171972933458
Matching residues: LEU222 SER223 GLY224 GLY226 LYS227 THR228
EC class: 0.0.0.0
GO terms:
Molecular function: carboxy-lyase activity, lyase activity, ATP binding, nucleotide binding, phosphoenolpyruvate carboxykinase (ATP) activity, purine nucleotide binding, phosphoenolpyruvate carboxykinase activity
Biological process: gluconeogenesis
Cellular component: glycosome
5. 1yggA [pdb]
LRMSD: 0.486879736185p-value: 0.000189452563063
Matching residues: LEU249 SER250 GLY251 GLY253 LYS254 THR255
EC class: GO terms:
Molecular function: carboxy-lyase activity, lyase activity, kinase activity, ATP binding, nucleotide binding, phosphoenolpyruvate carboxykinase (ATP) activity, purine nucleotide binding, phosphoenolpyruvate carboxykinase activity, carboxy-lyase activity, lyase activity, ATP binding, nucleotide binding, phosphoenolpyruvate carboxykinase (ATP) activity, purine nucleotide binding, phosphoenolpyruvate carboxykinase activity
Biological process: gluconeogenesis, gluconeogenesis
Cellular component: cytoplasm, cytoplasm
6. 1yvyB [pdb]
LRMSD: 0.724230706692p-value: 0.000273441692116
Matching residues: LEU1243 SER1244 GLY1245 GLY1247 LYS1248 THR1249
EC class: 4.1.1.49
GO terms:
Molecular function: carboxy-lyase activity, lyase activity, ATP binding, nucleotide binding, phosphoenolpyruvate carboxykinase (ATP) activity, purine nucleotide binding, phosphoenolpyruvate carboxykinase activity
Biological process: gluconeogenesis
Cellular component: cytoplasm
7. 2f48A [pdb]
LRMSD: 1.19304382801p-value: 0.000343041378073
Matching residues: LEU79 SER80 GLY81 GLY175 LYS203 THR204
EC class: 0.0.0.0
GO terms:
Molecular function: transferase activity, diphosphate-fructose-6-phosphate 1-phosphotransferase activity, ATP binding, 6-phosphofructokinase activity, nucleotide binding, kinase activity
Biological process: glycolysis
Cellular component: 6-phosphofructokinase complex
8. 2g04A [pdb]
LRMSD: 1.2799282074p-value: 0.000396509945858
Matching residues: THR203 LYS205 GLY206 GLY208 SER209 LEU210
EC class: 0.0.0.0
GO terms:
Molecular function: isomerase activity, catalytic activity
Biological process: metabolic process
9. 3cr8C [pdb]
LRMSD: 1.28853368759p-value: 0.000401988858357
Matching residues: LEU377 SER378 GLY379 GLY381 LYS382 THR384
EC class: 0.0.0.0
GO terms:
Molecular function: nucleotidyltransferase activity, transferase activity, kinase activity, sulfate adenylyltransferase (ATP) activity, adenylylsulfate kinase activity, transferase activity, transferring phosphorus-containing groups, ATP binding
Biological process: sulfate assimilation
10. 1f9oA [pdb]
LRMSD: 1.37978053093p-value: 0.00048145398614
Matching residues: LEU140 THR261 LYS262 GLY264 SER342 GLY345
EC class: 3.2.1.4
GO terms:
Molecular function: hydrolase activity, acting on glycosyl bonds, hydrolase activity, cellulase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity
Biological process: cellulose catabolic process, metabolic process, carbohydrate metabolic process, polysaccharide catabolic process
11. 2px0E [pdb]
LRMSD: 1.49528539181p-value: 0.000689681910444
Matching residues: SER183 GLY185 GLY187 LYS188 THR189 LEU290
EC class: GO terms:
Molecular function: GTP binding, nucleotide binding, 7S RNA binding, protein binding
Biological process: protein transport, transport, SRP-dependent cotranslational protein targeting to membrane, flagellum organization
Cellular component: plasma membrane, membrane, signal recognition particle
12. 2duoB [pdb]
LRMSD: 1.49827682972p-value: 0.000710174674168
Matching residues: THR91 LYS97 GLY130 GLY258 LEU262 SER263
EC class: GO terms:
Molecular function: sugar binding, calcium ion binding
Biological process: protein transport, transport
Cellular component: Golgi membrane, integral to membrane, membrane, Golgi apparatus
13. 1r9dB [pdb]
LRMSD: 1.50866913795p-value: 0.000732063723262
Matching residues: THR330 LYS331 GLY334 GLY335 SER770 LEU771
EC class: 0.0.0.0
GO terms:
Molecular function: formate C-acetyltransferase activity, catalytic activity
Biological process: metabolic process, glucose metabolic process
Cellular component: cytoplasm
14. 3c9fA [pdb]
LRMSD: 1.52704906464p-value: 0.000777743174694
Matching residues: GLY53 THR318 LYS320 GLY321 SER325 LEU327
EC class: 0.0.0.0
GO terms:
Molecular function: hydrolase activity
15. 1jjuA [pdb]
LRMSD: 1.52841234207p-value: 0.000802069960628
Matching residues: LYS31 THR32 LEU63 SER64 GLY68 GLY225
EC class: 0.0.0.0
GO terms:
Molecular function: heme binding, electron carrier activity, iron ion binding, oxidoreductase activity, oxidoreductase activity, acting on the CH-NH2 group of donors
Biological process: oxidation reduction, electron transport chain, transport
Cellular component: periplasmic space
16. 2dr3D [pdb]
LRMSD: 1.54105818272p-value: 0.000828087388072
Matching residues: LEU28 SER29 GLY30 GLY35 LYS36 THR37
EC class: GO terms:
Molecular function: ATP binding, nucleotide binding, nucleoside-triphosphatase activity, damaged DNA binding
Biological process: DNA repair
17. 1iv8A [pdb]
LRMSD: 1.55632591248p-value: 0.00088429095922
Matching residues: SER455 LEU457 GLY563 THR679 LYS680 GLY681
EC class: 0.0.0.0
GO terms:
Molecular function: cation binding, catalytic activity
Biological process: carbohydrate metabolic process
18. 1ls1A [pdb]
LRMSD: 1.56484258175p-value: 0.000946574611589
Matching residues: GLY108 SER109 GLY110 LYS111 THR112 LEU218
EC class: GO terms:
Molecular function: GTP binding, RNA binding, nucleotide binding, nucleoside-triphosphatase activity, 7S RNA binding, protein binding
Biological process: SRP-dependent cotranslational protein targeting to membrane
Cellular component: ribonucleoprotein complex, signal recognition particle, endoplasmic reticulum targeting, signal recognition particle
19. 2g8yB [pdb]
LRMSD: 1.57944476604p-value: 0.00101588119287
Matching residues: LEU115 SER251 GLY252 GLY253 LYS254 THR255
EC class: GO terms:
Molecular function: oxidoreductase activity
Biological process: oxidation reduction, metabolic process
Cellular component: cytoplasm
20. 2vdcE [pdb]
LRMSD: 1.60533058643p-value: 0.00113121408504
Matching residues: LEU1300 SER1301 GLY1302 GLY1334 LYS1335 THR1354
EC class: 1.4.1.13
GO terms:
Molecular function: iron ion binding, glutamate synthase (NADPH) activity, oxidoreductase activity, glutamate synthase activity, catalytic activity, 3 iron, 4 sulfur cluster binding, iron-sulfur cluster binding, metal ion binding, 4 iron, 4 sulfur cluster binding, iron-sulfur cluster binding, metal ion binding, oxidoreductase activity, iron ion binding, glutamate synthase (NADPH) activity, FAD binding, oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor, electron carrier activity
Biological process: cellular amino acid biosynthetic process, glutamine metabolic process, glutamate biosynthetic process, metabolic process, nitrogen compound metabolic process, oxidation reduction, oxidation reduction, cellular amino acid biosynthetic process, glutamate biosynthetic process
