The LabelHash Server

1b7yA motif

Motif residues: TRP149 HIS178 SER180 GLU206 GLN218 PHE258 PHE260

Table of Top 100 matches

Click here for a compact table with the top 100 matches.
The images below show the motif residues and the match residues superimposed. The carbon atoms are white in the motif and green in the match. Other atoms in the motif and match are colored by element. The C-alphas are shown as spheres, while the remaining motif and match atoms are shown in stick representation. The rest of the matching protein is shown in ribbon representation.

Downloads

Top 20 matches

For each match you can click on the "[pdb]" link to download a PDB file with the matching chain aligned with the motif.




4.  1ua8A [pdb]

LRMSD: 1.38
p-value: 0.00015
Matching residues: HIS17 SER19 ARG43 ALA94 PHE140 TYR152 GLN158
EC class: 0.0.0.0
Biological process: transport, protein transport, lipoprotein transport
Cellular Component: outer membrane-bounded periplasmic space, periplasmic space
Molecular function: protein binding


5.  3juyC [pdb]

LRMSD: 1.4
p-value: 0.000164
Matching residues: GLN1 GLN3 SER25 PHE29 PHE32 TRP117 ARG188


6.  3h09B [pdb]

LRMSD: 1.45
p-value: 0.000238
Matching residues: TYR143 THR145 GLN157 GLN159 TYR165 GLU253 GLY256
EC class: 3.4.21.72
Biological process: proteolysis, pathogenesis
Cellular Component: extracellular region, plasma membrane, cell outer membrane, cell surface, membrane, integral to membrane, outer membrane, periplasmic space
Molecular function: serine-type endopeptidase activity, peptidase activity, serine-type peptidase activity, hydrolase activity


7.  3lopA [pdb]

LRMSD: 1.48
p-value: 0.000307
Matching residues: GLN48 GLN86 TYR178 TYR208 THR212 ALA236 ARG315
EC class: 0.0.0.0




10.  1e6yA [pdb]

LRMSD: 1.53
p-value: 0.000447
Matching residues: GLU1319 GLN1345 SER1419 GLN1420 PHE1466 ASN1501 GLY1507
EC class: 2.8.4.1
Biological process: methanogenesis, methanogenesis, methanogenesis
Molecular function: transferase activity, metal ion binding, coenzyme-B sulfoethylthiotransferase activity, transferase activity, coenzyme-B sulfoethylthiotransferase activity, transferase activity, coenzyme-B sulfoethylthiotransferase activity


11.  1xfdD [pdb]

LRMSD: 1.54
p-value: 0.000472
Matching residues: ARG191 GLN212 ALA245 ASN260 TYR285 SER289 HIS301
EC class: 0.0.0.0
Biological process: proteolysis, cell death
Cellular Component: membrane, integral to membrane
Molecular function: dipeptidyl-peptidase activity


12.  1xkwA [pdb]

LRMSD: 1.54
p-value: 0.000472
Matching residues: GLN148 ASP206 GLY244 GLN263 THR302 PHE306 TYR325
EC class: 0.0.0.0
Biological process: transport, ion transport, iron ion transport, siderophore transport
Cellular Component: plasma membrane, cell outer membrane, membrane, integral to membrane
Molecular function: receptor activity, transporter activity, iron ion binding, siderophore transmembrane transporter activity



14.  3gjzB [pdb]

LRMSD: 1.55
p-value: 0.000499
Matching residues: PHE172 ASN192 HIS268 GLN270 GLU282 ALA297 THR304
EC class: 0.0.0.0


15.  3k4dA [pdb]

LRMSD: 1.58
p-value: 0.000659
Matching residues: ASP350 THR384 HIS388 GLN390 ALA411 TYR424 PHE425
Biological process: carbohydrate metabolic process, metabolic process, glucuronoside catabolic process
Molecular function: catalytic activity, hydrolase activity, hydrolyzing O-glycosyl compounds, beta-glucuronidase activity, protein binding, hydrolase activity, hydrolase activity


16.  3qfkA [pdb]

LRMSD: 1.59
p-value: 0.000697
Matching residues: ASN54 PHE57 GLY192 GLU195 HIS233 GLN235 THR250
Biological process: nucleotide catabolic process
Molecular function: nucleotide binding, hydrolase activity, hydrolase activity, acting on ester bonds


17.  2qf9B [pdb]

LRMSD: 1.6
p-value: 0.000738
Matching residues: ALA57 ARG88 TYR149 TYR150 THR155 HIS158 GLN188
EC class: 0.0.0.0