The LabelHash Server

1didA motif

Motif residues: PHE25 HIS53 ASP56 PHE93 TRP136 LYS182

Table of Top 100 matches

Click here for a compact table with the top 100 matches.
The images below show the motif residues and the match residues superimposed. The carbon atoms are white in the motif and green in the match. Other atoms in the motif and match are colored by element. The C-alphas are shown as spheres, while the remaining motif and match atoms are shown in stick representation. The rest of the matching protein is shown in ribbon representation.

Downloads

Top 20 matches

For each match you can click on the "[pdb]" link to download a PDB file with the matching chain aligned with the motif.

1.  1xylA [pdb]

LRMSD: 0.167
p-value: 0.000118
Matching residues: PHE25 HIS53 ASP56 PHE93 TRP136 LYS182
EC class: 5.3.1.5
Biological process: carbohydrate metabolic process, pentose-phosphate shunt, D-xylose metabolic process
Cellular Component: cytoplasm
Molecular function: xylose isomerase activity, isomerase activity, metal ion binding


2.  1clkA [pdb]

LRMSD: 0.189
p-value: 0.000139
Matching residues: PHE25 HIS53 ASP56 PHE93 TRP136 LYS182
EC class: 5.3.1.5
Biological process: carbohydrate metabolic process, pentose-phosphate shunt, D-xylose metabolic process
Cellular Component: cytoplasm
Molecular function: xylose isomerase activity, isomerase activity, metal ion binding


3.  5ximD [pdb]

LRMSD: 0.192
p-value: 0.000146
Matching residues: PHE26 HIS54 ASP57 PHE94 TRP137 LYS183
EC class: 5.3.1.5
Biological process: carbohydrate metabolic process, pentose-phosphate shunt, D-xylose metabolic process
Cellular Component: cytoplasm
Molecular function: xylose isomerase activity, isomerase activity, metal ion binding


4.  1mnzA [pdb]

LRMSD: 0.203
p-value: 0.000153
Matching residues: PHE26 HIS54 ASP57 PHE94 TRP137 LYS183
EC class: 5.3.1.5
Biological process: carbohydrate metabolic process, pentose-phosphate shunt, D-xylose metabolic process
Cellular Component: cytoplasm
Molecular function: xylose isomerase activity, isomerase activity, metal ion binding


5.  1xlbA [pdb]

LRMSD: 0.207
p-value: 0.00016
Matching residues: PHE25 HIS53 ASP56 PHE93 TRP136 LYS182
EC class: 5.3.1.5
Biological process: carbohydrate metabolic process, pentose-phosphate shunt, D-xylose metabolic process
Cellular Component: cytoplasm
Molecular function: xylose isomerase activity, isomerase activity, metal ion binding


6.  1bxbC [pdb]

LRMSD: 0.302
p-value: 0.000249
Matching residues: PHE25 HIS53 ASP56 PHE93 TRP136 LYS182
EC class: 5.3.1.5
Biological process: carbohydrate metabolic process, pentose-phosphate shunt, D-xylose metabolic process
Cellular Component: cytoplasm
Molecular function: xylose isomerase activity, isomerase activity, metal ion binding


7.  1bxcD [pdb]

LRMSD: 0.309
p-value: 0.000256
Matching residues: PHE25 HIS53 ASP56 PHE93 TRP136 LYS182
EC class: 5.3.1.5
Biological process: carbohydrate metabolic process, pentose-phosphate shunt, D-xylose metabolic process
Cellular Component: cytoplasm
Molecular function: xylose isomerase activity, isomerase activity, metal ion binding


8.  1a0cA [pdb]

LRMSD: 0.548
p-value: 0.000405
Matching residues: PHE59 HIS100 ASP103 PHE144 TRP187 LYS233
EC class: 5.3.1.5
Biological process: carbohydrate metabolic process, pentose-phosphate shunt, D-xylose metabolic process
Cellular Component: cytoplasm
Molecular function: xylose isomerase activity, isomerase activity, metal ion binding


9.  1a0eA [pdb]

LRMSD: 0.645
p-value: 0.000449
Matching residues: PHE59 HIS100 ASP103 PHE144 TRP187 LYS233
EC class: 5.3.1.5
Biological process: carbohydrate metabolic process, pentose-phosphate shunt, D-xylose metabolic process
Cellular Component: cytoplasm
Molecular function: xylose isomerase activity, isomerase activity, metal ion binding


10.  1a0dC [pdb]

LRMSD: 0.678
p-value: 0.000465
Matching residues: PHE58 HIS98 ASP101 PHE142 TRP185 LYS231
EC class: 5.3.1.5
Biological process: carbohydrate metabolic process, pentose-phosphate shunt, D-xylose metabolic process
Cellular Component: cytoplasm
Molecular function: xylose isomerase activity, isomerase activity, metal ion binding


11.  3m0yC [pdb]

LRMSD: 1.34
p-value: 0.000555
Matching residues: PHE66 HIS101 ASP105 PHE131 TRP179 LYS221
EC class: 0.0.0.0
Molecular function: isomerase activity


12.  2gthA [pdb]

LRMSD: 1.54
p-value: 0.000627
Matching residues: PHE43 HIS66 TRP81 PHE94 LYS100 ASP155
EC class: 0.0.0.0
Biological process: transcription, RNA-dependent, proteolysis, viral genome replication, viral protein processing, evasion by virus of host immune response, interspecies interaction between organisms, transcription, RNA-dependent, viral genome replication, proteolysis, viral genome replication, viral protein processing
Cellular Component: membrane, integral to membrane, viral replication complex, host cell cytoplasm, host cell membrane, host cell endoplasmic reticulum-Golgi intermediate compartment, host cell perinuclear region of cytoplasm, perinuclear region of cytoplasm, membrane, host cell membrane, membrane, integral to membrane, viral replication complex, host cell cytoplasm, host cell membrane, host cell perinuclear region of cytoplasm, perinuclear region of cytoplasm
Molecular function: nucleotide binding, RNA binding, catalytic activity, RNA-directed RNA polymerase activity, cysteine-type endopeptidase activity, helicase activity, nuclease activity, endonuclease activity, exonuclease activity, ATP binding, methyltransferase activity, peptidase activity, cysteine-type peptidase activity, zinc ion binding, transferase activity, nucleotidyltransferase activity, hydrolase activity, exoribonuclease activity, producing 5'-phosphomonoesters, metal ion binding, nucleotide binding, RNA binding, RNA-directed RNA polymerase activity, cysteine-type endopeptidase activity, helicase activity, ATP binding, methyltransferase activity, transferase activity, nucleotidyltransferase activity, hydrolase activity, exoribonuclease activity, producing 5'-phosphomonoesters, RNA binding, catalytic activity, RNA-directed RNA polymerase activity, peptidase activity, cysteine-type peptidase activity, zinc ion binding


13.  1olpA [pdb]

LRMSD: 1.62
p-value: 0.000695
Matching residues: TRP1 ASP71 PHE128 HIS136 LYS159 PHE175
EC class: 0.0.0.0
Molecular function: phospholipase C activity, zinc ion binding, hydrolase activity


14.  3b6rB [pdb]

LRMSD: 1.69
p-value: 0.000792
Matching residues: PHE194 TRP218 LYS223 ASP233 HIS234 PHE334
EC class: 2.7.3.2
Biological process: creatine metabolic process, brain development, cellular chloride ion homeostasis
Cellular Component: cytoplasm, mitochondrion, cytosol
Molecular function: nucleotide binding, catalytic activity, creatine kinase activity, protein binding, ATP binding, kinase activity, transferase activity, transferase activity


15.  1khoA [pdb]

LRMSD: 1.78
p-value: 0.00102
Matching residues: TRP1 ASP71 PHE128 HIS136 LYS159 PHE175
EC class: 3.1.4.3
Biological process: pathogenesis, cytolysis, hemolysis in other organism
Cellular Component: extracellular region
Molecular function: phospholipase C activity, zinc ion binding, hydrolase activity, hydrolase activity, acting on ester bonds, phosphatidylcholine phospholipase C activity


16.  2bkqD [pdb]

LRMSD: 1.79
p-value: 0.00107
Matching residues: ASP29 HIS30 PHE36 PHE116 LYS198 TRP202
EC class: 0.0.0.0
Biological process: proteolysis
Molecular function: protein binding, peptidase activity, cysteine-type peptidase activity, hydrolase activity


17.  1i0eB [pdb]

LRMSD: 1.8
p-value: 0.0011
Matching residues: PHE194 TRP218 LYS223 ASP233 HIS234 PHE334
EC class: 2.7.3.2
Biological process: creatine metabolic process, phosphocreatine biosynthetic process
Cellular Component: cytoplasm, cytosol
Molecular function: nucleotide binding, catalytic activity, creatine kinase activity, ATP binding, kinase activity, transferase activity, transferase activity


18.  3f83A [pdb]

LRMSD: 1.81
p-value: 0.00113
Matching residues: HIS39 ASP40 LYS107 PHE167 TRP171 PHE239
EC class: 0.0.0.0
Cellular Component: pilus, pilus


19.  1lxmA [pdb]

LRMSD: 1.81
p-value: 0.00116
Matching residues: ASP631 HIS649 LYS703 PHE752 TRP755 PHE843
EC class: 4.2.2.1
Biological process: carbohydrate metabolic process
Cellular Component: extracellular region
Molecular function: catalytic activity, lyase activity, carbon-oxygen lyase activity, acting on polysaccharides, carbohydrate binding


20.  3k60B [pdb]

LRMSD: 1.82
p-value: 0.00116
Matching residues: LYS86 PHE104 ASP132 HIS133 TRP148 PHE156
EC class: 0.0.0.0
Biological process: protein folding, response to stress
Cellular Component: cytoplasm
Molecular function: ATP binding, unfolded protein binding