The LabelHash Server
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Matching a motif
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Motif refinement
Top 150 matches
For each match you can click on the "[pdb]" link to download a PDB file with the matching chain aligned with the motif.
Download
a zip file with PDB files for all the matches and the motif itself.
PDB ID
LRMSD /
p
-value
Matching Residues
EC
Gene Ontology annotations
Biological Process
Cellular Component
Molecular Function
1jg4A
protein-l-isoaspartate o-methyltransferase
[pdb]
0.117
1.89e-05
97
GLU
99
GLY
101
GLY
160
ASP
179
LEU
183
GLY
2.1.1.77
protein modification process
cytoplasm
protein-L-isoaspartate (D-aspartate) O-methyltransferase activity
methyltransferase activity
transferase activity
2yxeB
protein-l-isoaspartate o-methyltransferase
[pdb]
0.194
5.18e-05
83
GLU
85
GLY
87
GLY
148
ASP
167
LEU
171
GLY
2.1.1.77
protein modification process
cytoplasm
protein-L-isoaspartate (D-aspartate) O-methyltransferase activity
methyltransferase activity
transferase activity
1vbfC
231aa long hypothetical protein-l-isoaspartate o-methyltransferase
[pdb]
0.288
0.000124
76
GLU
78
GLY
80
GLY
136
ASP
155
LEU
159
GLY
0.0.0.0
protein modification process
protein-L-isoaspartate (D-aspartate) O-methyltransferase activity
methyltransferase activity
transferase activity
3evzA
methyltransferase
[pdb]
0.305
0.000155
86
GLU
88
GLY
90
GLY
150
ASP
194
LEU
198
GLY
0.0.0.0
methyltransferase activity
1r18A
protein-l-isoaspartate(d-aspartate)-o-methyltransferase
[pdb]
0.322
0.000179
84
ASP
86
GLY
88
GLY
159
ASN
178
LEU
182
GLY
2.1.1.77
protein modification process
cytoplasm
protein-L-isoaspartate (D-aspartate) O-methyltransferase activity
methyltransferase activity
transferase activity
1o54A
sam-dependent o-methyltransferase
[pdb]
0.325
0.000192
106
ASP
108
GLY
110
GLY
171
ASP
191
LEU
195
GLY
0.0.0.0
tRNA methylation
tRNA (adenine-N1-)-methyltransferase activity
3lbfD
protein-l-isoaspartate o-methyltransferase
[pdb]
0.326
0.000192
81
GLU
83
GLY
85
GLY
143
ASP
162
LEU
166
GLY
protein modification process
cytoplasm
protein-L-isoaspartate (D-aspartate) O-methyltransferase activity
methyltransferase activity
transferase activity
3ofkD
nodulation protein s
[pdb]
0.382
0.000331
50
GLU
52
GLY
54
ALA
109
ASP
137
LEU
141
GLY
oligosaccharide biosynthetic process
nodulation
methyltransferase activity
S-adenosylmethionine-dependent methyltransferase activity
transferase activity
3lgaC
sam-dependent methyltransferase
[pdb]
0.396
0.000375
99
GLU
101
GLY
103
GLY
164
ASP
184
LEU
188
GLY
0.0.0.0
tRNA methylation
methyltransferase activity
tRNA (adenine-N1-)-methyltransferase activity
transferase activity
1dl5B
protein-l-isoaspartate o-methyltransferase
[pdb]
0.401
0.000375
81
GLU
83
GLY
85
GLY
146
ASP
165
LEU
169
GLY
2.1.1.77
protein modification process
cytoplasm
protein-L-isoaspartate (D-aspartate) O-methyltransferase activity
methyltransferase activity
transferase activity
3e23A
uncharacterized protein rpa2492
[pdb]
0.401
0.000375
49
GLU
51
GLY
53
GLY
104
ASP
131
LEU
135
GLY
0.0.0.0
metabolic process
methyltransferase activity
3ihtA
s-adenosyl-l-methionine methyl transferase
[pdb]
0.41
0.000423
45
GLU
47
GLY
49
GLY
107
SER
136
LEU
140
GLY
0.0.0.0
1i1nA
protein-l-isoaspartate o-methyltransferase
[pdb]
0.416
0.000449
83
ASP
85
GLY
87
GLY
153
ASP
172
LEU
176
GLY
2.1.1.77
protein modification process
protein methylation
protein repair
cytoplasm
endoplasmic reticulum
protein-L-isoaspartate (D-aspartate) O-methyltransferase activity
protein binding
methyltransferase activity
transferase activity
identical protein binding
3grzA
ribosomal protein l11 methyltransferase
[pdb]
0.436
0.000506
182
ASP
184
GLY
186
GLY
243
ASP
265
LEU
269
GLY
0.0.0.0
protein methylation
cytoplasm
methyltransferase activity
protein methyltransferase activity
transferase activity
3bgvA
mrna cap guanine-n7 methyltransferase
[pdb]
0.442
0.000536
39
ASP
41
GLY
43
GLY
115
ASP
144
LEU
148
GLY
2.1.1.56
mRNA capping
mRNA processing
nucleus
nucleoplasm
RNA binding
mRNA (guanine-N7-)-methyltransferase activity
methyltransferase activity
transferase activity
1i9gA
hypothetical protein rv2118c
[pdb]
0.453
0.000601
105
GLU
107
GLY
109
GLY
173
ASP
193
LEU
197
GLY
0.0.0.0
tRNA methylation
protein homotetramerization
plasma membrane
methyltransferase activity
S-adenosylmethionine-dependent methyltransferase activity
tRNA (adenine-N1-)-methyltransferase activity
transferase activity
3busA
methyltransferase
[pdb]
0.454
0.000601
67
ASP
69
GLY
71
GLY
131
ASP
156
LEU
160
GLY
0.0.0.0
metabolic process
metabolic process
methyltransferase activity
transferase activity
methyltransferase activity
transferase activity
2nxnA
ribosomal protein l11 methyltransferase
50s ribosomal protein l11
[pdb]
0.465
0.000671
126
MET
128
ALA
130
SER
186
ASP
208
LEU
212
GLY
0.0.0.0
protein methylation
translation
cytoplasm
ribosome
ribonucleoprotein complex
methyltransferase activity
protein methyltransferase activity
transferase activity
RNA binding
structural constituent of ribosome
rRNA binding
3g5lB
putative s-adenosylmethionine dependentmethyltransferase
[pdb]
0.468
0.000671
48
ASP
50
GLY
52
GLY
108
ASN
133
LEU
137
GLY
0.0.0.0
metabolic process
methyltransferase activity
3orhC
guanidinoacetate n-methyltransferase
[pdb]
0.486
0.000786
66
GLU
68
GLY
70
GLY
130
ASP
160
LEU
164
GLY
2.1.1.2
creatine metabolic process
creatine biosynthetic process
muscle contraction
cytosol
methyltransferase activity
transferase activity
guanidinoacetate N-methyltransferase activity
3dtnB
putative methyltransferase mm_2633
[pdb]
0.491
0.000787
48
ASP
50
GLY
52
GLY
109
ASP
136
LEU
140
GLY
0.0.0.0
metabolic process
methyltransferase activity
2vdvE
trna (guanine-n(7)-)-methyltransferase
[pdb]
0.491
0.000787
101
ASP
103
GLY
105
GLY
176
SER
209
LEU
213
GLY
2.1.1.33
tRNA modification
tRNA processing
tRNA methylation
nucleus
tRNA binding
RNA binding
protein binding
methyltransferase activity
tRNA (guanine-N7-)-methyltransferase activity
transferase activity
2pbfB
protein-l-isoaspartate o-methyltransferase beta-aspartate methyltransferase
[pdb]
0.493
0.000827
86
ASP
88
GLY
90
GLY
164
ASP
183
LEU
187
GLY
0.0.0.0
protein modification process
protein-L-isoaspartate (D-aspartate) O-methyltransferase activity
methyltransferase activity
transferase activity
3bkwB
s-adenosylmethionine dependent methyltransferase
[pdb]
0.493
0.000827
48
ASP
50
GLY
52
GLY
108
ASP
133
LEU
137
GLY
0.0.0.0
metabolic process
methyltransferase activity
2zwvA
probable ribosomal rna small subunitmethyltransferase
[pdb]
0.507
0.00091
239
ASP
241
GLY
243
GLY
300
ASP
330
LEU
334
GLY
0.0.0.0
rRNA modification
methylation
rRNA (adenine-N6,N6-)-dimethyltransferase activity
nucleic acid binding
methyltransferase activity
rRNA methyltransferase activity
transferase activity
3e05D
precorrin-6y c5,15-methyltransferase(decarboxylating)
[pdb]
0.507
0.00091
254
ASP
256
GLY
258
GLY
318
ASP
340
LEU
344
GLY
0.0.0.0
metabolic process
cobalamin biosynthetic process
methyltransferase activity
protein methyltransferase activity
transferase activity
precorrin-6Y C5,15-methyltransferase (decarboxylating) activity
3e7pA
putative methyltransferase
[pdb]
0.517
0.000953
53
ASP
55
GLY
57
GLY
117
ASP
141
LEU
145
GLY
0.0.0.0
metabolic process
methyltransferase activity
1kxzC
precorrin-6y methyltransferase/putativedecarboxylase
[pdb]
0.518
0.000953
39
ASP
41
GLY
43
GLY
102
ASP
124
LEU
128
GLY
0.0.0.0
cobalamin biosynthetic process
methyltransferase activity
protein methyltransferase activity
transferase activity
1p1cB
guanidinoacetate n-methyltransferase
[pdb]
0.525
0.000997
65
GLU
67
GLY
69
GLY
129
ASP
159
LEU
163
GLY
2.1.1.2
creatine biosynthetic process
S-adenosylhomocysteine metabolic process
S-adenosylmethionine metabolic process
methyltransferase activity
S-adenosylmethionine-dependent methyltransferase activity
transferase activity
guanidinoacetate N-methyltransferase activity
protein homodimerization activity
2o57D
putative sarcosine dimethylglycinemethyltransferase
[pdb]
0.528
0.00104
88
ASP
90
GLY
92
GLY
152
ASP
177
LEU
181
GLY
1f3lA
protein arginine methyltransferase prmt3
[pdb]
0.543
0.00113
258
ASP
260
GLY
262
GLY
321
ASP
349
LEU
353
GLY
0.0.0.0
protein methylation
peptidyl-arginine methylation
intracellular
cytoplasm
cytosol
ribosome
protein binding
methyltransferase activity
zinc ion binding
protein methyltransferase activity
S-adenosylmethionine-dependent methyltransferase activity
protein-arginine N-methyltransferase activity
transferase activity
protein-arginine omega-N asymmetric methyltransferase activity
metal ion binding
3hnrA
probable methyltransferase bt9727_4108
[pdb]
0.546
0.00113
51
GLU
53
GLY
55
GLY
108
ASP
135
LEU
139
GLY
0.0.0.0
metabolic process
methyltransferase activity
transferase activity
2b25A
hypothetical protein
[pdb]
0.555
0.00118
109
GLU
111
GLY
113
GLY
187
ASP
207
LEU
211
GLY
2.1.1.36
tRNA processing
tRNA methylation
methyltransferase activity
tRNA (adenine-N1-)-methyltransferase activity
transferase activity
3b3fB
histone-arginine methyltransferase carm1
[pdb]
0.556
0.00118
191
ASP
193
GLY
195
GLY
253
ASP
280
LEU
284
GLY
2.1.1.125
mRNA processing
positive regulation of cell proliferation
RNA splicing
pathogenesis
chromatin modification
response to cAMP
nucleus
cytoplasm
protein binding
methyltransferase activity
histone-arginine N-methyltransferase activity
transferase activity
3g5tA
trans-aconitate 3-methyltransferase
[pdb]
0.563
0.00128
42
ASP
44
GLY
46
GLY
115
ASP
139
LEU
143
GLY
2.1.1.145
metabolic process
cytoplasm
cytosol
methyltransferase activity
transferase activity
trans-aconitate 3-methyltransferase activity
1dusA
mj0882
[pdb]
0.564
0.00128
61
ASP
63
GLY
65
GLY
124
ASN
150
LEU
154
GLY
0.0.0.0
methyltransferase activity
transferase activity
2e58B
mnmc2
[pdb]
0.574
0.00132
102
ASP
104
GLY
106
GLY
188
ASP
216
ILE
220
GLY
0.0.0.0
1xxlB
ycgj protein
[pdb]
0.577
0.00137
18
ASP
20
GLY
22
GLY
80
ASP
105
LEU
109
GLY
0.0.0.0
metabolic process
methyltransferase activity
transferase activity
2nyuB
putative ribosomal rna methyltransferase 2
[pdb]
0.58
0.00137
28
ASP
30
GLY
32
ALA
99
ASP
135
LEU
139
GLY
0.0.0.0
rRNA processing
rRNA methylation
methylation
nucleus
nucleolus
mitochondrion
nucleic acid binding
methyltransferase activity
RNA methyltransferase activity
transferase activity
1oriA
protein arginine n-methyltransferase 1
[pdb]
0.585
0.00142
76
ASP
78
GLY
80
GLY
139
ASP
167
LEU
171
GLY
0.0.0.0
protein methylation
peptidyl-arginine methylation
peptidyl-arginine methylation
to asymmetrical-dimethyl arginine
nucleus
cytoplasm
protein complex
protein binding
methyltransferase activity
protein methyltransferase activity
histone-arginine N-methyltransferase activity
S-adenosylmethionine-dependent methyltransferase activity
[cytochrome c]-arginine N-methyltransferase activity
transferase activity
snoRNP binding
protein-arginine omega-N monomethyltransferase activity
protein-arginine omega-N asymmetric methyltransferase activity
2a14A
indolethylamine n-methyltransferase
[pdb]
0.592
0.00147
61
ASP
63
GLY
65
GLY
158
ASP
187
LEU
191
GLY
2.1.1.49
cytoplasm
methyltransferase activity
transferase activity
amine N-methyltransferase activity
2pjdA
ribosomal rna small subunit methyltransferase c
[pdb]
0.6
0.00152
202
ASP
204
GLY
206
GLY
263
ASP
293
LEU
297
GLY
2.1.1.52
rRNA processing
rRNA methylation
methylation
rRNA base methylation
cytoplasm
nucleic acid binding
methyltransferase activity
rRNA (guanine-N2-)-methyltransferase activity
transferase activity
1p91B
ribosomal rna large subunit methyltransferase a
[pdb]
0.607
0.00157
91
ASP
93
GLY
95
GLY
150
ASP
168
VAL
172
GLY
2.1.1.51
rRNA processing
metabolic process
rRNA base methylation
protein binding
methyltransferase activity
rRNA (guanine-N1-)-methyltransferase activity
transferase activity
metal ion binding
2fytA
protein arginine n-methyltransferase 3
[pdb]
0.608
0.00157
278
ASP
280
GLY
282
GLY
341
ASP
369
LEU
373
GLY
0.0.0.0
protein methylation
biological_process
intracellular
cytoplasm
methyltransferase activity
zinc ion binding
protein methyltransferase activity
protein-arginine N-methyltransferase activity
transferase activity
metal ion binding
3d2lD
sam-dependent methyltransferase
[pdb]
0.608
0.00157
38
ASP
40
GLY
42
GLY
97
ASP
126
LEU
130
GLY
0.0.0.0
metabolic process
methyltransferase activity
transferase activity
1nkvC
hypothetical protein yjhp
[pdb]
0.61
0.00157
42
ASP
44
GLY
46
GLY
105
ASP
130
LEU
134
GLY
0.0.0.0
metabolic process
membrane
integral to membrane
protein binding
methyltransferase activity
2zfuB
cerebral protein 1
[pdb]
0.614
0.00161
314
ASP
316
GLY
318
GLY
358
ASP
382
LEU
386
GLY
0.0.0.0
chromatin silencing at rDNA
rRNA processing
chromatin modification
nucleus
chromatin silencing complex
nucleolus
rDNA heterochromatin
protein binding
methyltransferase activity
S-adenosylmethionine-dependent methyltransferase activity
transferase activity
methylated histone residue binding
1g6q2
hnrnp arginine n-methyltransferase
[pdb]
0.616
0.00161
64
ASP
66
GLY
68
GLY
127
ASP
155
LEU
159
GLY
0.0.0.0
mRNA export from nucleus
protein methylation
peptidyl-arginine methylation
negative regulation of transcription termination
DNA-dependent
nucleus
cytoplasm
protein binding
methyltransferase activity
protein methyltransferase activity
transferase activity
protein-arginine omega-N monomethyltransferase activity
protein-arginine omega-N asymmetric methyltransferase activity
identical protein binding
3e8sA
putative sam dependent methyltransferase
[pdb]
0.623
0.00166
57
ASP
59
GLY
61
GLY
117
ASP
141
LEU
145
GLY
0.0.0.0
2gs9B
hypothetical protein tt1324
[pdb]
0.625
0.00166
43
GLU
45
GLY
47
GLY
98
ASP
123
LEU
127
GLY
0.0.0.0
metabolic process
methyltransferase activity
1l1eB
mycolic acid synthase
[pdb]
0.641
0.0018
70
ASP
72
GLY
74
GLY
131
ASP
158
LEU
162
GLY
0.0.0.0
lipid biosynthetic process
pathogenesis
active evasion of host immune response
S-adenosylmethionine metabolic process
modulation by symbiont of host innate immunity
mycolic acid biosynthetic process
cytoplasm
methyltransferase activity
cyclopropane-fatty-acyl-phospholipid synthase activity
transferase activity
1ri4A
mrna capping enzyme
[pdb]
0.658
0.0019
70
ASP
72
GLY
74
GLY
135
ASP
164
LEU
168
GLY
2.1.1.56
mRNA capping
mRNA processing
nucleus
RNA binding
mRNA (guanine-N7-)-methyltransferase activity
methyltransferase activity
transferase activity
3ccfB
cyclopropane-fatty-acyl-phospholipid synthase
[pdb]
0.662
0.00194
44
ASP
46
GLY
48
GLY
100
ASP
125
LEU
129
GLY
0.0.0.0
metabolic process
methyltransferase activity
transferase activity
trans-aconitate 2-methyltransferase activity
1xtpA
lmaj004091aaa
[pdb]
0.664
0.00194
99
ASP
101
GLY
103
GLY
160
ASP
187
LEU
191
GLY
0.0.0.0
methyltransferase activity
3dlcA
putative s-adenosyl-l-methionine-dependentmethyltransferase
[pdb]
0.665
0.00194
48
ASP
50
GLY
52
GLY
112
ASP
137
LEU
141
GLY
0.0.0.0
metabolic process
methyltransferase activity
transferase activity
1vlmB
sam-dependent methyltransferase
[pdb]
0.673
0.00199
41
GLU
43
GLY
45
GLY
92
ASP
117
LEU
121
GLY
0.0.0.0
metabolic process
methyltransferase activity
1kp9B
cyclopropane-fatty-acyl-phospholipid synthase 1
[pdb]
0.682
0.00207
70
ASP
72
GLY
74
GLY
131
ASP
158
LEU
162
GLY
2.1.1.79
lipid biosynthetic process
S-adenosylmethionine metabolic process
Actinobacterium-type cell wall biogenesis
mycolic acid biosynthetic process
lipid biosynthetic process
cytoplasm
plasma membrane
cytoplasm
methyltransferase activity
cyclopropane-fatty-acyl-phospholipid synthase activity
transferase activity
methyltransferase activity
cyclopropane-fatty-acyl-phospholipid synthase activity
transferase activity
2p35A
trans-aconitate 2-methyltransferase
[pdb]
0.687
0.00207
36
ASP
38
GLY
40
GLY
94
ASP
119
LEU
123
GLY
2.1.1.144
metabolic process
cytoplasm
methyltransferase activity
transferase activity
trans-aconitate 2-methyltransferase activity
3i9fB
putative type 11 methyltransferase
[pdb]
0.693
0.00211
37
ASP
39
GLY
41
GLY
91
ASP
116
LEU
120
GLY
0.0.0.0
metabolic process
methyltransferase activity
2ex4A
adrenal gland protein ad-003
[pdb]
0.694
0.00211
68
ASP
70
GLY
72
GLY
131
ASP
158
LEU
162
GLY
0.0.0.0
spindle organization
chromosome segregation
N-terminal peptidyl-proline dimethylation
N-terminal peptidyl-serine dimethylation
N-terminal peptidyl-serine trimethylation
nucleus
protein binding
methyltransferase activity
protein methyltransferase activity
transferase activity
2gh1A
methyltransferase
[pdb]
0.703
0.00216
45
ASP
47
GLY
49
GLY
108
ASP
133
VAL
137
GLY
0.0.0.0
methyltransferase activity
transferase activity
3o8kA
fascin
[pdb]
0.704
0.00219
1492
GLU
1390
GLY
1488
ALA
1259
SER
1142
VAL
1257
GLU
0.0.0.0
cell proliferation
actin cytoskeleton organization
actin filament bundle assembly
cytoplasm
actin cytoskeleton
filopodium
actin binding
protein binding
protein binding
bridging
2i62C
nicotinamide n-methyltransferase
[pdb]
0.715
0.00223
62
ASP
64
GLY
66
GLY
159
ASP
188
LEU
192
GLY
2.1.1.1
cytoplasm
nicotinamide N-methyltransferase activity
methyltransferase activity
transferase activity
2gq8A
oxidoreductase, fmn-binding
[pdb]
0.715
0.00223
189
ASN
185
GLY
242
GLY
215
ASP
218
VAL
216
GLU
0.0.0.0
metabolic process
catalytic activity
FMN binding
oxidoreductase activity
1tw2B
carminomycin 4-o-methyltransferase
[pdb]
0.719
0.00227
184
ASP
186
GLY
188
GLY
246
ASP
273
LEU
277
GLY
0.0.0.0
antibiotic biosynthetic process
nucleotide binding
ATP binding
methyltransferase activity
O-methyltransferase activity
transferase activity
2iipD
nicotinamide n-methyltransferase
[pdb]
0.731
0.00231
61
ASP
63
GLY
65
GLY
158
ASP
187
LEU
191
GLY
2.1.1.1
cytoplasm
nicotinamide N-methyltransferase activity
methyltransferase activity
transferase activity
3mggB
methyltransferase
[pdb]
0.754
0.00245
41
GLU
43
GLY
45
GLY
105
ASP
130
LEU
134
GLY
0.0.0.0
metabolic process
methyltransferase activity
transferase activity
1xdsB
protein rdmb
[pdb]
0.757
0.00245
188
ASP
190
GLY
192
GLY
250
ASP
277
LEU
281
GLY
O-methyltransferase activity
1tpyA
methoxy mycolic acid synthase 2
[pdb]
0.758
0.00245
70
ASP
72
GLY
74
GLY
131
ASP
158
LEU
162
GLY
0.0.0.0
lipid biosynthetic process
Actinobacterium-type cell wall biogenesis
mycolic acid biosynthetic process
plasma membrane
methyltransferase activity
cyclopropane-fatty-acyl-phospholipid synthase activity
transferase activity
1z45A
gal10 bifunctional protein
[pdb]
0.762
0.00248
111
ASN
114
GLY
118
LEU
100
SER
103
ILE
99
GLU
5.1.3.3, 5.1.3.2
carbohydrate metabolic process
galactose metabolic process
metabolic process
galactose catabolic process via UDP-galactose
cellular metabolic process
soluble fraction
catalytic activity
UDP-glucose 4-epimerase activity
aldose 1-epimerase activity
binding
isomerase activity
carbohydrate binding
coenzyme binding
3egeA
putative methyltransferase from antibioticbiosynthesis pathway
[pdb]
0.776
0.00254
39
ASP
41
GLY
43
GLY
95
ASP
120
ILE
123
GLY
0.0.0.0
metabolic process
methyltransferase activity
1yzhA
trna (guanine-n(7)-)-methyltransferase
[pdb]
0.795
0.00263
44
GLU
46
GLY
48
GLY
110
ASP
143
LEU
147
GLY
2.1.1.33
tRNA modification
tRNA processing
methyltransferase activity
tRNA (guanine-N7-)-methyltransferase activity
transferase activity
3bigA
fructose-1,6-bisphosphatase class ii glpx
[pdb]
0.81
0.00268
225
ASP
126
GLY
129
ALA
277
ASN
279
ILE
107
GLY
3.1.3.11
carbohydrate metabolic process
glycerol metabolic process
cytoplasm
hydrolase activity
manganese ion binding
fructose 1,6-bisphosphate 1-phosphatase activity
2p8jA
s-adenosylmethionine-dependent methyltransferase
[pdb]
0.821
0.00271
28
ASP
30
GLY
32
GLY
90
SER
117
LEU
121
GLY
0.0.0.0
metabolic process
methyltransferase activity
transferase activity
3ky9A
proto-oncogene vav
[pdb]
0.824
0.00274
542
GLN
543
GLY
553
ALA
377
ASN
380
LEU
378
GLU
apoptosis
induction of apoptosis by extracellular signals
regulation of Rho protein signal transduction
intracellular
cytosol
plasma membrane
sequence-specific DNA binding transcription factor activity
guanyl-nucleotide exchange factor activity
Rho guanyl-nucleotide exchange factor activity
protein binding
metal ion binding
3o8oH
6-phosphofructokinase subunit beta
6-phosphofructokinase subunit alpha
[pdb]
0.855
0.00285
864
ASP
599
GLY
859
LEU
915
SER
912
VAL
914
GLY
glycolysis
proton transport
glycolysis
proton transport
cytoplasm
mitochondrion
6-phosphofructokinase complex
cytoplasm
mitochondrion
6-phosphofructokinase complex
nucleotide binding
6-phosphofructokinase activity
protein binding
ATP binding
kinase activity
transferase activity
metal ion binding
proton-transporting ATPase activity
rotational mechanism
nucleotide binding
6-phosphofructokinase activity
protein binding
ATP binding
kinase activity
transferase activity
3p9iA
caffeic acid o-methyltransferase
[pdb]
0.865
0.00291
203
ASP
205
GLY
207
GLY
257
ASP
284
LEU
288
GLY
0.0.0.0
methyltransferase activity
O-methyltransferase activity
catechol O-methyltransferase activity
transferase activity
protein dimerization activity
2vrwB
proto-oncogene vav
ras-related c3 botulinum toxin substrate 1
[pdb]
0.865
0.00291
542
GLN
543
GLY
553
ALA
377
ASN
380
LEU
378
GLU
0.0.0.0
apoptosis
cellular component movement
inflammatory response
cell adhesion
cell-matrix adhesion
small GTPase mediated signal transduction
induction of apoptosis by extracellular signals
response to wounding
anatomical structure morphogenesis
regulation of hydrogen peroxide metabolic process
positive regulation of lamellipodium assembly
lamellipodium assembly
actin filament polymerization
ruffle organization
positive regulation of Rho protein signal transduction
negative regulation of receptor-mediated endocytosis
localization within membrane
regulation of respiratory burst
regulation of Rho protein signal transduction
intracellular
cytosol
plasma membrane
membrane
melanosome
intracellular
nucleotide binding
GTPase activity
protein binding
GTP binding
enzyme binding
GTP-dependent protein binding
thioesterase binding
guanyl-nucleotide exchange factor activity
Rho guanyl-nucleotide exchange factor activity
protein binding
metal ion binding
2uveB
exopolygalacturonase
[pdb]
0.871
0.00291
272
ASN
219
GLY
217
LEU
304
ASP
301
VAL
303
GLU
0.0.0.0
3m1tA
putative phosphohydrolase
[pdb]
0.872
0.00294
201
GLN
215
GLY
247
GLY
177
ASN
139
ILE
141
GLU
0.0.0.0
2d80A
phb depolymerase
[pdb]
0.874
0.00294
282
GLN
226
GLY
212
ALA
40
SER
38
LEU
42
GLY
0.0.0.0
carbohydrate metabolic process
extracellular region
hydrolase activity
hydrolyzing O-glycosyl compounds
hydrolase activity
3cggB
sam-dependent methyltransferase
[pdb]
0.893
0.00305
51
ASP
53
GLY
55
GLY
108
ASP
136
LEU
140
GLY
0.0.0.0
metabolic process
metabolic process
methyltransferase activity
transferase activity
methyltransferase activity
transferase activity
2ft3E
biglycan
[pdb]
0.908
0.00313
132
ASP
155
GLY
182
ALA
88
ASN
85
LEU
63
ASN
0.0.0.0
peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan
extracellular region
proteinaceous extracellular matrix
cell surface
transport vesicle
extracellular matrix
sarcolemma
intracellular part
protein binding
glycosaminoglycan binding
extracellular matrix binding
3glmC
glutaconyl-coa decarboxylase subunit a
[pdb]
0.911
0.00313
149
ASN
197
GLY
152
GLY
275
ASP
278
VAL
274
ASN
0.0.0.0
ligase activity
2fgeB
nonspecific peptide aaltra
zinc metalloprotease (insulinase family)
[pdb]
0.915
0.00318
670
GLN
605
GLY
609
LEU
743
SER
741
ILE
740
GLY
0.0.0.0
proteolysis
response to cadmium ion
protein maturation by peptide bond cleavage
mitochondrion
mitochondrial matrix
chloroplast
plastid
chloroplast stroma
chloroplast envelope
apoplast
catalytic activity
metalloendopeptidase activity
peptidase activity
metallopeptidase activity
zinc ion binding
hydrolase activity
metal ion binding
3gybB
transcriptional regulators (laci-familytranscriptional regulatory protein)
[pdb]
0.916
0.00318
242
ASN
268
GLY
282
LEU
186
SER
190
LEU
187
GLY
regulation of transcription
intracellular
DNA binding
sequence-specific DNA binding transcription factor activity
3hccA
phenylethanolamine n-methyltransferase
[pdb]
0.918
0.00318
77
ASP
79
GLY
81
GLY
176
ASP
205
LEU
209
GLY
2.1.1.28
catecholamine biosynthetic process
cytosol
phenylethanolamine N-methyltransferase activity
methyltransferase activity
transferase activity
2bcjQ
guanine nucleotide-binding protein g(i)/g(s)/g(t) beta subunit 1
g alpha i1, guanine nucleotide-binding proteing(q), alpha subunit
guanine nucleotide-binding protein g(i)/g(s)/g(o) gamma-2 subunit
g-protein coupled receptor kinase 2
[pdb]
0.938
0.00333
209
GLN
207
GLY
188
GLY
242
SER
238
VAL
245
GLU
0.0.0.0
signal transduction
G-protein coupled receptor protein signaling pathway
cell proliferation
regulation of the force of heart contraction
desensitization of G-protein coupled receptor protein signaling pathway
G-protein coupled receptor internalization
negative regulation of the force of heart contraction by chemical signal
protein phosphorylation
intracellular protein transport
signal transduction
G-protein coupled receptor protein signaling pathway
muscarinic acetylcholine receptor signaling pathway
tachykinin receptor signaling pathway
heart development
regulation of signal transduction
phosphorylation
peptidyl-serine phosphorylation
peptidyl-threonine phosphorylation
negative regulation of striated muscle contraction
cardiac muscle contraction
signal transduction
G-protein coupled receptor protein signaling pathway
negative regulation of synaptic transmission
skeletal system development
regulation of action potential
protein ADP-ribosylation
signal transduction
G-protein coupled receptor protein signaling pathway
activation of adenylate cyclase activity by G-protein signaling pathway
glutamate signaling pathway
heart development
behavior
post-embryonic development
neuron remodeling
forebrain neuron development
embryonic digit morphogenesis
regulation of melanocyte differentiation
developmental pigmentation
activation of phospholipase C activity by dopamine receptor signaling pathway
signal transduction
G-protein coupled receptor protein signaling pathway
activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger
cell proliferation
sensory perception of taste
Golgi apparatus
heterotrimeric G-protein complex
plasma membrane
membrane
membrane fraction
cytoplasm
cytosol
membrane
membrane fraction
cytoplasm
Golgi apparatus
heterotrimeric G-protein complex
plasma membrane
membrane raft
membrane fraction
heterotrimeric G-protein complex
plasma membrane
photoreceptor outer segment
heterotrimeric G-protein complex
GTPase activity
signal transducer activity
nucleotide binding
protein kinase activity
protein serine/threonine kinase activity
G-protein coupled receptor kinase activity
signal transducer activity
protein binding
ATP binding
kinase activity
transferase activity
alpha-2A adrenergic receptor binding
Edg-2 lysophosphatidic acid receptor binding
beta-adrenergic receptor kinase activity
nucleotide binding
GTPase activity
signal transducer activity
protein binding
GTP binding
guanyl nucleotide binding
metabotropic serotonin receptor binding
nucleotide binding
GTPase activity
signal transducer activity
GTPase activator activity
protein binding
GTP binding
guanyl nucleotide binding
GTPase activity
signal transducer activity
3ifeA
peptidase t
[pdb]
0.953
0.00346
32
GLN
36
GLY
38
LEU
20
ASN
178
ILE
21
GLU
3.4.11.4
proteolysis
peptide metabolic process
metabolic process
cytoplasm
aminopeptidase activity
protein binding
peptidase activity
metallopeptidase activity
zinc ion binding
hydrolase activity
tripeptide aminopeptidase activity
metal ion binding
2qm1D
glucokinase
[pdb]
0.957
0.00354
114
ASP
308
GLY
307
ALA
75
SER
83
VAL
85
GLY
0.0.0.0
glycolysis
cytoplasm
glucokinase activity
kinase activity
3k81C
mp18 rna editing complex protein
single strand antibody vhh domain
[pdb]
0.959
0.00354
121
SER
76
ASN
78
MET
24
VAL
99
LEU
23
VAL
single-stranded DNA binding
2p4sA
purine nucleoside phosphorylase
[pdb]
0.96
0.00354
300
ASP
298
GLY
297
LEU
213
ASP
272
LEU
271
GLU
0.0.0.0
nucleobase
nucleoside
catalytic activity
purine-nucleoside phosphorylase activity
transferase activity
transferase activity
transferring glycosyl groups
2ix8A
elongation factor 3a
[pdb]
0.961
0.00354
1711
ASN
1715
GLY
1771
ALA
1702
ASN
1965
VAL
1700
GLY
0.0.0.0
translation
translational elongation
translational termination
cytoplasm
ribosome
cytosolic ribosome
nucleotide binding
RNA binding
translation elongation factor activity
binding
protein binding
ATP binding
ATPase activity
nucleoside-triphosphatase activity
rRNA binding
1iyxB
enolase
[pdb]
0.966
0.00362
342
GLN
344
GLY
111
LEU
314
ASP
316
LEU
313
GLY
4.2.1.11
glycolysis
phosphopyruvate hydratase complex
extracellular region
cytoplasm
cell surface
magnesium ion binding
phosphopyruvate hydratase activity
lyase activity
metal ion binding
1bvoA
transcription factor gambif1
dna duplex
[pdb]
0.967
0.00362
150
GLN
148
GLY
73
GLY
156
ASP
161
LEU
159
GLU
0.0.0.0
regulation of transcription
nucleus
sequence-specific DNA binding transcription factor activity
1yu0A
major tropism determinant (mtd-p1)
[pdb]
0.97
0.00362
192
ASP
373
GLY
371
ALA
163
ASN
167
LEU
164
GLU
0.0.0.0
binding
2qyoB
o-methyltransferase
[pdb]
0.974
0.00371
199
ASP
201
GLY
203
GLY
253
ASP
280
VAL
287
GLY
0.0.0.0
methyltransferase activity
O-methyltransferase activity
protein dimerization activity
2xzlA
5- r(*up*up*up*up*up*up*up*up*u) -3
atp-dependent helicase nam7
[pdb]
0.979
0.00381
501
ASN
504
GLY
507
ALA
492
SER
490
VAL
491
GLU
nuclear-transcribed mRNA catabolic process
nonsense-mediated decay
nuclear-transcribed mRNA catabolic process
regulation of translational termination
intracellular mRNA localization
protein ubiquitination
chromatin silencing at silent mating-type cassette
nuclear-transcribed mRNA catabolic process
nucleus
cytoplasm
polysome
mitochondrion
nucleotide binding
nucleic acid binding
DNA binding
ATP-dependent RNA helicase activity
helicase activity
protein binding
ATP binding
RNA-dependent ATPase activity
zinc ion binding
hydrolase activity
nucleoside-triphosphatase activity
metal ion binding
1fzdE
fibrinogen-420
[pdb]
0.981
0.00381
797
ASN
800
GLY
821
GLY
762
ASN
734
LEU
763
ASN
0.0.0.0
signal transduction
blood coagulation
platelet activation
protein polymerization
response to calcium ion
extracellular region
fibrinogen complex
extracellular space
plasma membrane
external side of plasma membrane
platelet alpha granule
platelet alpha granule lumen
receptor binding
protein binding
protein binding
bridging
3f6tA
aspartate aminotransferase
[pdb]
0.988
0.00391
470
GLN
490
GLY
35
LEU
467
ASN
464
LEU
466
ASN
0.0.0.0
biosynthetic process
catalytic activity
L-aspartate:2-oxoglutarate aminotransferase activity
transaminase activity
transferase activity
transferase activity
transferring nitrogenous groups
1fp1D
isoliquiritigenin 2'-o-methyltransferase
[pdb]
0.989
0.00391
215
ASP
217
GLY
219
GLY
269
ASP
296
LEU
300
GLY
0.0.0.0
methyltransferase activity
O-methyltransferase activity
transferase activity
protein dimerization activity
3lqbA
loc792177 protein
[pdb]
0.989
0.00391
102
ASN
106
GLY
2
ALA
94
SER
38
ILE
40
ASN
0.0.0.0
proteolysis
metalloendopeptidase activity
peptidase activity
metallopeptidase activity
zinc ion binding
hydrolase activity
metal ion binding
1jbqD
cystathionine beta-synthase
[pdb]
0.995
0.00402
149
ASN
151
GLY
154
LEU
349
SER
303
VAL
348
GLY
4.2.1.22
cysteine biosynthetic process from serine
L-serine metabolic process
L-serine catabolic process
metabolic process
cellular amino acid biosynthetic process
cysteine biosynthetic process via cystathionine
cysteine biosynthetic process
L-cysteine catabolic process
homocysteine catabolic process
homocysteine metabolic process
hydrogen sulfide biosynthetic process
nucleus
nucleolus
cytoplasm
cytosol
intracellular membrane-bounded organelle
catalytic activity
cystathionine beta-synthase activity
protein binding
lyase activity
enzyme binding
heme binding
pyridoxal phosphate binding
ubiquitin protein ligase binding
identical protein binding
protein homodimerization activity
metal ion binding
2be1A
serine/threonine-protein kinase/endoribonucleaseire1
peptide
[pdb]
0.998
0.00402
127
ASP
130
GLY
154
LEU
348
SER
142
ILE
140
GLY
2.7.11.1
inositol metabolic process
mRNA processing
protein phosphorylation
response to unfolded protein
endoplasmic reticulum unfolded protein response
fungal-type cell wall organization
nucleus
endoplasmic reticulum
endoplasmic reticulum membrane
membrane
integral to membrane
nucleotide binding
catalytic activity
endoribonuclease activity
protein kinase activity
protein serine/threonine kinase activity
ATP binding
kinase activity
transferase activity
hydrolase activity
endoribonuclease activity
producing 5'-phosphomonoesters
identical protein binding
protein homodimerization activity
metal ion binding
3kgdA
rna 3'-terminal phosphate cyclase
[pdb]
1
0.00413
126
ASP
124
GLY
97
GLY
238
SER
196
VAL
195
GLU
0.0.0.0
RNA processing
nucleoplasm
cytoplasm
nucleotide binding
catalytic activity
RNA-3'-phosphate cyclase activity
ATP binding
ligase activity
ligase activity
1zgaA
isoflavanone 4'-o-methyltransferase'
[pdb]
1
0.00413
205
ASP
207
GLY
209
GLY
259
ASP
286
ILE
293
GLY
0.0.0.0
methyltransferase activity
O-methyltransferase activity
transferase activity
protein dimerization activity
3a5qB
benzalacetone synthase
[pdb]
1.01
0.00426
373
GLU
161
GLY
164
LEU
271
ASN
267
LEU
270
ASN
0.0.0.0
metabolic process
biosynthetic process
catalytic activity
acyltransferase activity
transferase activity
transferase activity
1kcwA
ceruloplasmin
[pdb]
1.01
0.00426
971
GLU
969
GLY
902
LEU
632
ASN
565
VAL
631
GLY
1.16.3.1
transport
ion transport
copper ion transport
cellular iron ion homeostasis
oxidation-reduction process
extracellular region
extracellular space
ferroxidase activity
copper ion binding
oxidoreductase activity
metal ion binding
chaperone binding
1ru4A
pectate lyase
[pdb]
1.01
0.0044
299
ASP
275
GLY
281
GLY
317
ASN
294
VAL
292
GLY
4.2.2.2
extracellular region
extracellular region
lyase activity
pectate lyase activity
lyase activity
pectate lyase activity
2hxoA
putative tetr-family transcriptional regulator
[pdb]
1.01
0.0044
163
ASN
161
GLY
108
ALA
180
ASP
183
LEU
181
GLU
0.0.0.0
regulation of transcription
DNA binding
sequence-specific DNA binding transcription factor activity
specific transcriptional repressor activity
transcription regulator activity
1qhnA
chloramphenicol phosphotransferase
[pdb]
1.01
0.0044
55
GLU
53
GLY
52
GLY
59
ASP
137
VAL
139
GLY
0.0.0.0
response to antibiotic
nucleotide binding
ATP binding
kinase activity
transferase activity
1psoE
pepsin 3a
pepstatin
[pdb]
1.02
0.0044
287
GLN
223
GLY
298
LEU
244
ASP
246
VAL
240
ASN
3.4.23.1
proteolysis
digestion
cellular_component
extracellular region
aspartic-type endopeptidase activity
peptidase activity
hydrolase activity
3m3wB
protein kinase c and casein kinase ii substrate protein 3
[pdb]
1.02
0.0044
73
GLN
71
GLY
67
ALA
277
ASP
281
LEU
279
GLU
endocytosis
negative regulation of endocytosis
positive regulation of membrane protein ectodomain proteolysis
cytoplasm
plasma membrane
membrane
trans-Golgi network
protein binding
cytoskeletal protein binding
3qn3B
enolase
[pdb]
1.02
0.00456
335
GLN
337
GLY
111
LEU
307
ASP
309
LEU
306
GLY
glycolysis
phosphopyruvate hydratase complex
extracellular region
cytoplasm
cell surface
magnesium ion binding
phosphopyruvate hydratase activity
lyase activity
metal ion binding
1fwxD
nitrous oxide reductase
[pdb]
1.02
0.00456
386
ASP
330
GLY
332
GLY
91
ASP
446
ILE
92
GLY
1.7.99.6
oxidation-reduction process
membrane
periplasmic space
cytochrome-c oxidase activity
copper ion binding
oxidoreductase activity
metal ion binding
nitrous-oxide reductase activity
3b89A
16s rrna methylase
[pdb]
1.02
0.00456
115
ASN
113
GLY
136
LEU
92
ASP
94
LEU
90
GLU
0.0.0.0
response to antibiotic
methyltransferase activity
rRNA methyltransferase activity
1qlbA
fumarate reductase iron-sulfur protein
fumarate reductase flavoprotein subunit
fumarate reductase cytochrome b subunit
[pdb]
1.02
0.00456
78
VAL
76
PRO
405
LEU
557
ASP
604
ILE
606
ASN
1.3.99.1
transport
electron transport chain
oxidation-reduction process
tricarboxylic acid cycle
transport
electron transport chain
oxidation-reduction process
tricarboxylic acid cycle
transport
electron transport chain
respiratory chain
respiratory chain
plasma membrane
membrane
integral to membrane
respiratory chain
succinate dehydrogenase activity
electron carrier activity
oxidoreductase activity
oxidoreductase activity
acting on the CH-CH group of donors
flavin adenine dinucleotide binding
succinate dehydrogenase activity
electron carrier activity
oxidoreductase activity
metal ion binding
iron-sulfur cluster binding
2 iron
2 sulfur cluster binding
3 iron
4 sulfur cluster binding
1kyzA
caffeic acid 3-o-methyltransferase
[pdb]
1.02
0.00456
206
ASP
208
GLY
210
GLY
260
ASP
287
LEU
291
GLY
2.1.1.68
lignin biosynthetic process
methyltransferase activity
O-methyltransferase activity
transferase activity
protein dimerization activity
caffeate O-methyltransferase activity
1v8cD
moad related protein
[pdb]
1.02
0.00456
153
GLU
149
GLY
122
GLY
79
ASP
5
LEU
4
ASN
0.0.0.0
sulfur compound metabolic process
threonine synthase activity
lyase activity
1w99A
pesticidial crystal protein cry4ba
[pdb]
1.03
0.00456
507
ASP
500
GLY
502
GLY
488
SER
491
LEU
522
GLU
0.0.0.0
defense response
pathogenesis
sporulation resulting in formation of a cellular spore
receptor binding
2pc8A
hypothetical protein xog1
[pdb]
1.03
0.00456
305
ASN
310
GLY
316
ALA
146
ASN
26
LEU
148
GLY
3.2.1.58
carbohydrate metabolic process
cellular cell wall organization
metabolic process
fungal-type cell wall organization
extracellular region
cell surface
catalytic activity
glucan exo-1,3-beta-glucosidase activity
hydrolase activity
hydrolyzing O-glycosyl compounds
hydrolase activity
hydrolase activity
2pa6B
enolase
[pdb]
1.03
0.00473
342
GLN
344
GLY
118
LEU
314
ASP
316
LEU
313
GLY
4.2.1.11
glycolysis
phosphopyruvate hydratase complex
extracellular region
cytoplasm
cell surface
magnesium ion binding
phosphopyruvate hydratase activity
lyase activity
metal ion binding
2ckjC
xanthine oxidoreductase
[pdb]
1.03
0.00473
586
GLN
114
GLY
796
GLY
93
SER
98
LEU
92
GLY
1.17.3.2, 1.17.1.4
lactation
xanthine catabolic process
regulation of epithelial cell differentiation
oxidation-reduction process
extracellular region
cytoplasm
peroxisome
catalytic activity
xanthine dehydrogenase activity
xanthine oxidase activity
binding
iron ion binding
electron carrier activity
oxidoreductase activity
molybdenum ion binding
protein homodimerization activity
molybdopterin cofactor binding
metal ion binding
flavin adenine dinucleotide binding
iron-sulfur cluster binding
2 iron
1fp2A
isoflavone o-methytransferase
[pdb]
1.03
0.00473
194
ASP
196
GLY
198
GLY
248
ASP
275
VAL
282
GLY
2.1.1.150
methyltransferase activity
O-methyltransferase activity
transferase activity
isoflavone 7-O-methyltransferase activity
protein dimerization activity
1ohaA
acetylglutamate kinase
[pdb]
1.03
0.00473
181
ASP
184
GLY
186
LEU
16
SER
20
LEU
18
GLU
2.7.2.8
arginine biosynthetic process
cellular amino acid biosynthetic process
arginine biosynthetic process
cellular amino acid biosynthetic process
cytoplasm
cytoplasm
nucleotide binding
acetylglutamate kinase activity
ATP binding
kinase activity
transferase activity
nucleotide binding
acetylglutamate kinase activity
ATP binding
kinase activity
transferase activity
2eihA
alcohol dehydrogenase
[pdb]
1.03
0.00491
40
ASN
62
GLY
61
LEU
177
SER
181
VAL
176
GLY
0.0.0.0
metabolic process
oxidation-reduction process
catalytic activity
binding
zinc ion binding
oxidoreductase activity
3mgaB
enterochelin esterase
[pdb]
1.03
0.00491
381
ASP
90
GLY
148
ALA
286
SER
353
VAL
311
GLY
0.0.0.0
iron ion transport
cytoplasm
iron ion binding
enterochelin esterase activity
2ppvA
uncharacterized protein
[pdb]
1.04
0.00491
194
ASN
10
GLY
182
LEU
162
SER
129
VAL
160
GLU
0.0.0.0
3n0tD
dipeptidyl peptidase 2
[pdb]
1.04
0.00511
200
GLN
196
GLY
190
LEU
366
ASP
364
VAL
363
ASN
3.4.14.2
proteolysis
extracellular region
lysosome
cytosol
cytoplasmic membrane-bounded vesicle
cytoplasmic vesicle
aminopeptidase activity
protein binding
peptidase activity
serine-type peptidase activity
dipeptidyl-peptidase activity
hydrolase activity
3bv6F
metal-dependent hydrolase
[pdb]
1.04
0.00511
121
ASP
65
GLY
67
GLY
116
SER
114
LEU
143
GLY
0.0.0.0
hydrolase activity
2iobA
bifunctional glutathionylspermidinesynthetase/amidase
[pdb]
1.04
0.00511
341
GLU
343
GLY
362
ALA
241
ASN
238
VAL
242
GLY
6.3.1.8, 3.5.1.78
nucleotide binding
catalytic activity
protein binding
ATP binding
glutathionylspermidine amidase activity
glutathionylspermidine synthase activity
hydrolase activity
ligase activity
1e9iC
enolase
[pdb]
1.05
0.00511
344
GLN
346
GLY
111
LEU
316
ASP
318
LEU
315
GLY
4.2.1.11
glycolysis
glycolysis
glycolysis
glycolysis
phosphopyruvate hydratase complex
extracellular region
cytoplasm
cytoskeleton
cell surface
phosphopyruvate hydratase complex
extracellular region
cytoplasm
cytoskeleton
cell surface
phosphopyruvate hydratase complex
extracellular region
cytoplasm
cytoskeleton
cell surface
phosphopyruvate hydratase complex
extracellular region
cytoplasm
cytosol
cytoskeleton
cell surface
membrane
magnesium ion binding
phosphopyruvate hydratase activity
lyase activity
metal ion binding
magnesium ion binding
phosphopyruvate hydratase activity
lyase activity
metal ion binding
magnesium ion binding
phosphopyruvate hydratase activity
lyase activity
metal ion binding
magnesium ion binding
phosphopyruvate hydratase activity
protein binding
lyase activity
identical protein binding
metal ion binding
2idoC
dna polymerase iii epsilon subunit
hot protein
[pdb]
1.05
0.00511
32
LEU
34
ILE
11
GLN
70
GLY
74
ALA
71
SER
2.7.7.7
DNA replication
DNA replication
intracellular
DNA binding
DNA-directed DNA polymerase activity
nucleic acid binding
DNA binding
DNA-directed DNA polymerase activity
nuclease activity
exonuclease activity
protein binding
transferase activity
nucleotidyltransferase activity
hydrolase activity
metal ion binding
3js2B
basic fibroblast growth factor receptor 1
[pdb]
1.05
0.00532
641
ASP
643
GLY
645
ALA
568
ASN
631
VAL
567
GLY
0.0.0.0
MAPKKK cascade
skeletal system development
angiogenesis
ureteric bud development
in utero embryonic development
organ induction
positive regulation of mesenchymal cell proliferation
chondrocyte differentiation
protein phosphorylation
brain development
salivary gland morphogenesis
positive regulation of cell proliferation
fibroblast growth factor receptor signaling pathway
regulation of gene expression
cell growth
lung development
embryonic limb morphogenesis
midbrain development
neuron projection development
regulation of cell proliferation
inner ear morphogenesis
negative regulation of apoptosis
paraxial mesoderm development
regulation of lateral mesodermal cell fate specification
cell maturation
blood vessel morphogenesis
generation of neurons
mesenchymal cell differentiation
positive regulation of cardiac muscle cell proliferation
branching involved in salivary gland morphogenesis
lung-associated mesenchyme development
regulation of branching involved in salivary gland morphogenesis by mesenchymal-epithelial signaling
positive regulation of MAPKKK cascade by fibroblast growth factor receptor signaling pathway
extracellular region
membrane fraction
plasma membrane
integral to plasma membrane
membrane
integral to membrane
nucleotide binding
protein kinase activity
protein tyrosine kinase activity
transmembrane receptor protein tyrosine kinase activity
receptor activity
fibroblast growth factor receptor activity
protein binding
ATP binding
heparin binding
kinase activity
transferase activity
fibroblast growth factor binding
3oidD
enoyl-[acyl-carrier-protein] reductase [nadph]
[pdb]
1.05
0.00532
89
ASN
17
GLY
21
ALA
157
SER
154
VAL
155
GLY
0.0.0.0
fatty acid biosynthetic process
metabolic process
lipid biosynthetic process
oxidation-reduction process
catalytic activity
enoyl-[acyl-carrier-protein] reductase (NADPH
B-specific) activity
binding
3abzC
beta-glucosidase i
[pdb]
1.05
0.00532
345
ASN
343
GLY
385
ALA
351
SER
648
LEU
644
GLY
carbohydrate metabolic process
metabolic process
hydrolase activity
hydrolyzing O-glycosyl compounds
beta-glucosidase activity
hydrolase activity
3coxA
cholesterol oxidase
[pdb]
1.05
0.00532
216
GLU
212
GLY
213
LEU
66
SER
96
LEU
94
GLY
1.1.3.6
lipid metabolic process
steroid metabolic process
cholesterol metabolic process
oxidation-reduction process
extracellular region
oxidoreductase activity
oxidoreductase activity
acting on CH-OH group of donors
cholesterol oxidase activity
2o3eA
neurolysin
[pdb]
1.05
0.00532
486
GLN
650
GLY
647
LEU
441
SER
437
LEU
440
GLY
3.4.24.16
proteolysis
cytoplasm
mitochondrion
mitochondrial intermembrane space
metalloendopeptidase activity
peptidase activity
metallopeptidase activity
hydrolase activity
metal ion binding
3b7sA
rsr peptide
leukotriene a-4 hydrolase
[pdb]
1.05
0.00532
401
GLU
399
GLY
398
GLY
246
ASP
243
ILE
245
GLU
3.3.2.6
proteolysis
leukotriene metabolic process
inflammatory response
response to zinc ion
leukotriene biosynthetic process
response to peptide hormone stimulus
Type I pneumocyte differentiation
nucleus
cytoplasm
catalytic activity
epoxide hydrolase activity
leukotriene-A4 hydrolase activity
binding
protein binding
peptidase activity
metallopeptidase activity
zinc ion binding
hydrolase activity
metal ion binding
2o6qA
variable lymphocyte receptor a
[pdb]
1.05
0.00532
237
ASN
268
GLY
273
GLY
189
ASN
186
LEU
163
GLY
0.0.0.0
receptor activity
protein binding
2qltA
(dl)-glycerol-3-phosphatase 1
[pdb]
1.05
0.00532
199
GLU
204
GLY
207
ALA
238
ASN
114
VAL
116
GLY
0.0.0.0
glycerol biosynthetic process
response to osmotic stress
metabolic process
nucleus
cytoplasm
glycerol-1-phosphatase activity
catalytic activity
protein binding
hydrolase activity
1ryeB
glucose-fructose oxidoreductase
[pdb]
1.05
0.00532
351
GLN
349
GLY
346
GLY
370
ASN
233
VAL
232
GLU
1.1.99.28
metabolic process
oxidation-reduction process
periplasmic space
catalytic activity
binding
oxidoreductase activity
glucose-fructose oxidoreductase activity
2j6lA
aldehyde dehydrogenase family 7 member a1
[pdb]
1.06
0.00556
480
GLU
482
GLY
466
GLY
244
SER
242
LEU
162
GLY
1.2.1.31
cellular aldehyde metabolic process
sensory perception of sound
metabolic process
oxidation-reduction process
cellular_component
nucleus
cytoplasm
mitochondrion
cytosol
aldehyde dehydrogenase (NAD) activity
L-aminoadipate-semialdehyde dehydrogenase activity
betaine-aldehyde dehydrogenase activity
oxidoreductase activity
1yo8A
thrombospondin-2
[pdb]
1.06
0.00556
1004
GLU
1148
GLY
868
GLY
955
SER
947
VAL
956
GLU
0.0.0.0
cell adhesion
extracellular region
platelet alpha granule lumen
structural molecule activity
calcium ion binding
protein binding
heparin binding
3czoC
histidine ammonia-lyase
[pdb]
1.06
0.00556
120
ASP
230
GLY
232
ALA
191
ASP
155
VAL
193
ASN
0.0.0.0
histidine metabolic process
biosynthetic process
catalytic activity
histidine ammonia-lyase activity
lyase activity
ammonia-lyase activity
1tvnA
cellulase
[pdb]
1.06
0.00556
255
ASN
23
GLY
55
LEU
227
ASN
234
VAL
198
GLY
0.0.0.0
carbohydrate metabolic process
cell adhesion
metabolic process
extracellular region
catalytic activity
hydrolase activity
hydrolyzing O-glycosyl compounds
calcium ion binding
cellulase activity
hydrolase activity
hydrolase activity
acting on glycosyl bonds
3cwcA
putative glycerate kinase 2
[pdb]
1.06
0.00581
46
GLU
135
GLY
95
GLY
8
ASP
304
VAL
292
GLU
0.0.0.0
organic acid phosphorylation
glycerate kinase activity
kinase activity
1bwlA
protein (nadph dehydrogenase 1)
[pdb]
1.06
0.00581
200
GLN
195
GLY
121
ALA
219
ASN
217
ILE
218
GLU
1.6.99.1
metabolic process
oxidation-reduction process
catalytic activity
NADPH dehydrogenase activity
FMN binding
oxidoreductase activity
1l1jA
heat shock protease htra
[pdb]
1.07
0.00581
221
ASN
207
GLY
83
GLY
198
ASP
233
LEU
232
ASN
0.0.0.0
proteolysis
response to stress
catalytic activity
serine-type endopeptidase activity
protein binding
peptidase activity
2nupB
vesicle-trafficking protein sec22b
protein transport protein sec23a
protein transport protein sec24a
[pdb]
1.07
0.00581
621
GLN
617
GLY
645
GLY
628
SER
685
VAL
631
GLY
0.0.0.0
transport
ER to Golgi vesicle-mediated transport
protein transport
vesicle-mediated transport
transport
intracellular protein transport
ER to Golgi vesicle-mediated transport
protein transport
cellular membrane organization
vesicle-mediated transport
transport
intracellular protein transport
ER to Golgi vesicle-mediated transport
protein transport
cellular membrane organization
vesicle-mediated transport
Golgi membrane
endoplasmic reticulum
endoplasmic reticulum membrane
ER-Golgi intermediate compartment
Golgi apparatus
membrane
integral to membrane
ER-Golgi intermediate compartment membrane
melanosome
Golgi membrane
cytoplasm
endoplasmic reticulum
endoplasmic reticulum membrane
Golgi apparatus
membrane
COPII vesicle coat
perinuclear region of cytoplasm
Golgi membrane
endoplasmic reticulum
Golgi apparatus
cytosol
membrane
COPII vesicle coat
smooth endoplasmic reticulum membrane
perinuclear region of cytoplasm
protein binding
molecular_function
protein binding
zinc ion binding
protein binding
zinc ion binding