The LabelHash Server

1kpgA motif

Motif residues: ASP17 GLY72 GLY74 TRP75 GLY76 PHE200

Table of Top 100 matches

Click here for a compact table with the top 100 matches.
The images below show the motif residues and the match residues superimposed. The carbon atoms are white in the motif and green in the match. Other atoms in the motif and match are colored by element. The C-alphas are shown as spheres, while the remaining motif and match atoms are shown in stick representation. The rest of the matching protein is shown in ribbon representation.

Downloads

Top 20 matches

For each match you can click on the "[pdb]" link to download a PDB file with the matching chain aligned with the motif.

1.  1tpyA [pdb]

LRMSD: 0.095
p-value: 3.04e-05
Matching residues: ASP17 GLY72 GLY74 TRP75 GLY76 PHE200
EC class: 0.0.0.0
Biological process: lipid biosynthetic process, Actinobacterium-type cell wall biogenesis, mycolic acid biosynthetic process
Cellular Component: plasma membrane
Molecular function: methyltransferase activity, cyclopropane-fatty-acyl-phospholipid synthase activity, transferase activity




4.  2hhgA [pdb]

LRMSD: 1.38
p-value: 0.000275
Matching residues: ASP27 PHE88 GLY95 GLY119 GLY121 TRP123
EC class: 0.0.0.0


5.  2id3B [pdb]

LRMSD: 1.38
p-value: 0.000285
Matching residues: TRP59 GLY60 GLY63 GLY64 ASP72 PHE130
EC class: 0.0.0.0
Biological process: regulation of transcription
Molecular function: DNA binding, sequence-specific DNA binding transcription factor activity, specific transcriptional repressor activity, transcription regulator activity



7.  2rdyA [pdb]

LRMSD: 1.43
p-value: 0.000355
Matching residues: ASP621 TRP626 GLY629 PHE638 GLY682 GLY689
EC class: 0.0.0.0
Molecular function: catalytic activity


8.  1n6fF [pdb]

LRMSD: 1.45
p-value: 0.000397
Matching residues: GLY208 ASP966 TRP988 GLY989 PHE1011 GLY1021
EC class: 0.0.0.0
Biological process: proteolysis
Cellular Component: cytoplasm
Molecular function: protein binding, peptidase activity, serine-type peptidase activity, hydrolase activity


9.  3n2tA [pdb]

LRMSD: 1.48
p-value: 0.000446
Matching residues: GLY26 TRP28 GLY60 GLY62 ASP93 PHE100
EC class: 0.0.0.0
Biological process: oxidation-reduction process
Molecular function: oxidoreductase activity


10.  2yxvB [pdb]

LRMSD: 1.48
p-value: 0.000463
Matching residues: TRP67 GLY68 GLY155 ASP197 PHE210 GLY218
EC class: 0.0.0.0
Biological process: response to copper ion, oxidation-reduction process
Cellular Component: periplasmic space
Molecular function: copper ion binding, oxidoreductase activity, oxidoreductase activity, oxidizing metal ions


11.  3bgtA [pdb]

LRMSD: 1.53
p-value: 0.000587
Matching residues: PHE27 GLY107 GLY108 TRP112 GLY113 ASP235
EC class: 4.1.1.4
Molecular function: lyase activity, carboxy-lyase activity, acetoacetate decarboxylase activity


12.  1pf3A [pdb]

LRMSD: 1.55
p-value: 0.000661
Matching residues: TRP67 GLY68 GLY155 ASP197 PHE210 GLY218
EC class: 0.0.0.0
Biological process: response to copper ion, oxidation-reduction process
Cellular Component: periplasmic space
Molecular function: copper ion binding, oxidoreductase activity, oxidoreductase activity, oxidizing metal ions


13.  2o1oA [pdb]

LRMSD: 1.58
p-value: 0.000811
Matching residues: GLY76 ASP95 GLY101 TRP102 PHE161 GLY223
EC class: 0.0.0.0
Biological process: isoprenoid biosynthetic process
Molecular function: transferase activity



15.  2oz3A [pdb]

LRMSD: 1.62
p-value: 0.000958
Matching residues: ASP20 GLY127 GLY293 TRP294 GLY296 PHE353
EC class: 0.0.0.0
Biological process: metabolic process, cellular amino acid catabolic process
Molecular function: catalytic activity


16.  1kb0A [pdb]

LRMSD: 1.62
p-value: 0.000999
Matching residues: GLY68 PHE456 ASP497 TRP541 GLY542 GLY546
EC class: 0.0.0.0
Biological process: oxidation-reduction process
Cellular Component: membrane, outer membrane-bounded periplasmic space, periplasmic space
Molecular function: iron ion binding, calcium ion binding, electron carrier activity, oxidoreductase activity, oxidoreductase activity, acting on CH-OH group of donors, heme binding



18.  1t3tA [pdb]

LRMSD: 1.65
p-value: 0.00113
Matching residues: TRP305 GLY369 GLY372 GLY373 ASP473 PHE1094
EC class: 6.3.5.3
Biological process: purine nucleotide biosynthetic process, 'de novo' IMP biosynthetic process, glutamine metabolic process
Cellular Component: cytoplasm
Molecular function: nucleotide binding, catalytic activity, phosphoribosylformylglycinamidine synthase activity, ATP binding, ligase activity


19.  1kkcA [pdb]

LRMSD: 1.66
p-value: 0.00123
Matching residues: PHE125 GLY135 GLY140 TRP141 GLY142 ASP154
EC class: 1.15.1.1
Biological process: superoxide metabolic process, oxidation-reduction process
Cellular Component: mitochondrion, mitochondrial matrix
Molecular function: superoxide dismutase activity, oxidoreductase activity, metal ion binding


20.  3fawA [pdb]

LRMSD: 1.66
p-value: 0.00123
Matching residues: GLY805 GLY832 TRP833 GLY859 ASP863 PHE961
EC class: 0.0.0.0
Biological process: carbohydrate metabolic process
Cellular Component: cell wall, cell surface, membrane
Molecular function: catalytic activity, hydrolase activity, hydrolyzing O-glycosyl compounds, carbohydrate binding