The LabelHash Server

1kpgA motif

Motif residues: ASP17 GLY72 GLY74 TRP75 GLY76 PHE200

Top 20 matches

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The images below show the motif residues and the match residues superimposed. The carbon atoms are white in the motif and green in the match. Other atoms in the motif and match are colored by element. The C-alphas are shown as spheres, while the remaining motif and match atoms are shown in stick representation. The rest of the matching protein is shown in ribbon representation.

1.  1kpgA

LRMSD: 0.0
p-value: 3.12591373586e-06
Matching residues: ASP17 GLY72 GLY74 TRP75 GLY76 PHE200
EC class: 2.1.1.79
GO terms:
Molecular function: transferase activity, methyltransferase activity, cyclopropane-fatty-acyl-phospholipid synthase activity, transferase activity, methyltransferase activity, cyclopropane-fatty-acyl-phospholipid synthase activity
Biological process: lipid biosynthetic process, lipid biosynthetic process
Cellular component: cytoplasm, cytoplasm

2.  1kpgC

LRMSD: 0.0769040808082
p-value: 1.80660699698e-05
Matching residues: ASP17 GLY72 GLY74 TRP75 GLY76 PHE200
EC class: 2.1.1.79
GO terms:
Molecular function: transferase activity, methyltransferase activity, cyclopropane-fatty-acyl-phospholipid synthase activity, transferase activity, methyltransferase activity, cyclopropane-fatty-acyl-phospholipid synthase activity
Biological process: lipid biosynthetic process, lipid biosynthetic process
Cellular component: cytoplasm, cytoplasm

3.  1kpgD

LRMSD: 0.0824612304568
p-value: 1.80951083166e-05
Matching residues: ASP17 GLY72 GLY74 TRP75 GLY76 PHE200
EC class: 2.1.1.79
GO terms:
Molecular function: transferase activity, methyltransferase activity, cyclopropane-fatty-acyl-phospholipid synthase activity, transferase activity, methyltransferase activity, cyclopropane-fatty-acyl-phospholipid synthase activity
Biological process: lipid biosynthetic process, lipid biosynthetic process
Cellular component: cytoplasm, cytoplasm

4.  1kpgB

LRMSD: 0.08321839571
p-value: 2.32888651226e-05
Matching residues: ASP17 GLY72 GLY74 TRP75 GLY76 PHE200
EC class: 2.1.1.79
GO terms:
Molecular function: transferase activity, methyltransferase activity, cyclopropane-fatty-acyl-phospholipid synthase activity, transferase activity, methyltransferase activity, cyclopropane-fatty-acyl-phospholipid synthase activity
Biological process: lipid biosynthetic process, lipid biosynthetic process
Cellular component: cytoplasm, cytoplasm

5.  1tpyA

LRMSD: 0.0949709042907
p-value: 2.95682348224e-05
Matching residues: ASP17 GLY72 GLY74 TRP75 GLY76 PHE200
EC class: 0.0.0.0
GO terms:
Molecular function: transferase activity, methyltransferase activity, cyclopropane-fatty-acyl-phospholipid synthase activity
Biological process: lipid biosynthetic process

6.  1kphA

LRMSD: 0.117456011474
p-value: 5.71858108742e-05
Matching residues: ASP17 GLY72 GLY74 TRP75 GLY76 PHE200
EC class: 2.1.1.79
GO terms:
Molecular function: transferase activity, methyltransferase activity, cyclopropane-fatty-acyl-phospholipid synthase activity, transferase activity, methyltransferase activity, cyclopropane-fatty-acyl-phospholipid synthase activity
Biological process: lipid biosynthetic process, lipid biosynthetic process
Cellular component: cytoplasm, cytoplasm

7.  1kphB

LRMSD: 0.120640903711
p-value: 5.72085555177e-05
Matching residues: ASP17 GLY72 GLY74 TRP75 GLY76 PHE200
EC class: 2.1.1.79
GO terms:
Molecular function: transferase activity, methyltransferase activity, cyclopropane-fatty-acyl-phospholipid synthase activity, transferase activity, methyltransferase activity, cyclopropane-fatty-acyl-phospholipid synthase activity
Biological process: lipid biosynthetic process, lipid biosynthetic process
Cellular component: cytoplasm, cytoplasm

8.  1kphC

LRMSD: 0.127878546715
p-value: 6.43509047222e-05
Matching residues: ASP17 GLY72 GLY74 TRP75 GLY76 PHE200
EC class: 2.1.1.79
GO terms:
Molecular function: transferase activity, methyltransferase activity, cyclopropane-fatty-acyl-phospholipid synthase activity, transferase activity, methyltransferase activity, cyclopropane-fatty-acyl-phospholipid synthase activity
Biological process: lipid biosynthetic process, lipid biosynthetic process
Cellular component: cytoplasm, cytoplasm

9.  1kphD

LRMSD: 0.130417957902
p-value: 6.43687162665e-05
Matching residues: ASP17 GLY72 GLY74 TRP75 GLY76 PHE200
EC class: 2.1.1.79
GO terms:
Molecular function: transferase activity, methyltransferase activity, cyclopropane-fatty-acyl-phospholipid synthase activity, transferase activity, methyltransferase activity, cyclopropane-fatty-acyl-phospholipid synthase activity
Biological process: lipid biosynthetic process, lipid biosynthetic process
Cellular component: cytoplasm, cytoplasm

10.  1kpiA

LRMSD: 0.205384001136
p-value: 9.36307478696e-05
Matching residues: ASP25 GLY80 GLY82 TRP83 GLY84 PHE215
EC class: 2.1.1.79
GO terms:
Molecular function: transferase activity, methyltransferase activity, cyclopropane-fatty-acyl-phospholipid synthase activity
Biological process: lipid biosynthetic process
Cellular component: cytoplasm

11.  1l1eB

LRMSD: 1.06622815132
p-value: 0.000104660248326
Matching residues: ASP17 GLY72 GLY74 TRP75 GLY76 PHE200
EC class: 0.0.0.0
GO terms:
Molecular function: transferase activity, cyclopropane-fatty-acyl-phospholipid synthase activity
Biological process: lipid biosynthetic process

12.  1l1eA

LRMSD: 1.1317640543
p-value: 0.000114239679533
Matching residues: ASP17 GLY72 GLY74 TRP75 GLY76 PHE200
EC class: 0.0.0.0
GO terms:
Molecular function: transferase activity, cyclopropane-fatty-acyl-phospholipid synthase activity
Biological process: lipid biosynthetic process

13.  2npkA

LRMSD: 1.29166352749
p-value: 0.000124261976453
Matching residues: PHE31 GLY244 TRP245 GLY264 GLY268 ASP313
EC class: 0.0.0.0
GO terms:
Molecular function: ammonium transmembrane transporter activity, ammonia transporter activity
Biological process: ammonium transport, transport, carbon dioxide transport
Cellular component: plasma membrane, integral to membrane, membrane

14.  1t67A

LRMSD: 1.32179927826
p-value: 0.000134837304358
Matching residues: GLY139 TRP141 ASP183 PHE207 GLY265 GLY303
EC class: 3.5.1.98
GO terms:
Molecular function: transcription factor binding, histone deacetylase activity, hydrolase activity
Biological process: regulation of transcription, chromatin modification, regulation of transcription, DNA-dependent, transcription, chromatin assembly or disassembly, negative regulation of transcription from RNA polymerase II promoter, histone deacetylation
Cellular component: nucleus, histone deacetylase complex, cytoplasm, nuclear chromosome

15.  1t64A

LRMSD: 1.3222233057
p-value: 0.000139825351653
Matching residues: GLY139 TRP141 ASP183 PHE207 GLY265 GLY303
EC class: 3.5.1.98
GO terms:
Molecular function: transcription factor binding, histone deacetylase activity, hydrolase activity
Biological process: chromatin modification, regulation of transcription, DNA-dependent, transcription, chromatin assembly or disassembly, negative regulation of transcription from RNA polymerase II promoter, histone deacetylation, regulation of transcription
Cellular component: nucleus, histone deacetylase complex, cytoplasm, nuclear chromosome

16.  3f0rC

LRMSD: 1.33037400246
p-value: 0.000146310019772
Matching residues: GLY139 TRP141 ASP183 PHE207 GLY265 GLY303
EC class: 3.5.1.98
GO terms:
Molecular function: transcription factor binding, histone deacetylase activity, hydrolase activity
Biological process: chromatin modification, regulation of transcription, DNA-dependent, transcription, chromatin assembly or disassembly, negative regulation of transcription from RNA polymerase II promoter, histone deacetylation, regulation of transcription
Cellular component: nucleus, histone deacetylase complex, cytoplasm, nuclear chromosome

17.  3f07C

LRMSD: 1.3477563858
p-value: 0.000166533325682
Matching residues: GLY139 TRP141 ASP183 PHE207 GLY265 GLY303
EC class: 3.5.1.98
GO terms:
Molecular function: transcription factor binding, histone deacetylase activity, hydrolase activity
Biological process: regulation of transcription, chromatin modification, regulation of transcription, DNA-dependent, transcription, chromatin assembly or disassembly, negative regulation of transcription from RNA polymerase II promoter, histone deacetylation
Cellular component: nucleus, histone deacetylase complex, cytoplasm, nuclear chromosome

18.  3f07B

LRMSD: 1.35027265549
p-value: 0.000182109972229
Matching residues: GLY139 TRP141 ASP183 PHE207 GLY265 GLY303
EC class: 3.5.1.98
GO terms:
Molecular function: transcription factor binding, histone deacetylase activity, hydrolase activity
Biological process: regulation of transcription, chromatin modification, regulation of transcription, DNA-dependent, transcription, chromatin assembly or disassembly, negative regulation of transcription from RNA polymerase II promoter, histone deacetylation
Cellular component: nucleus, histone deacetylase complex, cytoplasm, nuclear chromosome

19.  2fk7A

LRMSD: 1.35196113586
p-value: 0.000182144111022
Matching residues: ASP29 GLY81 GLY83 TRP84 GLY85 PHE209
EC class: 0.0.0.0
GO terms:
Molecular function: transferase activity, methyltransferase activity, cyclopropane-fatty-acyl-phospholipid synthase activity
Biological process: lipid biosynthetic process

20.  1t64B

LRMSD: 1.35317862034
p-value: 0.000182168718311
Matching residues: GLY139 TRP141 ASP183 PHE207 GLY265 GLY303
EC class: 3.5.1.98
GO terms:
Molecular function: transcription factor binding, histone deacetylase activity, hydrolase activity
Biological process: chromatin modification, regulation of transcription, DNA-dependent, transcription, chromatin assembly or disassembly, negative regulation of transcription from RNA polymerase II promoter, histone deacetylation, regulation of transcription
Cellular component: nucleus, histone deacetylase complex, cytoplasm, nuclear chromosome

Copyright 2008–2010 Rice University
Created by Mark Moll, Drew H. Bryant, and Lydia E. Kavraki
Physical and Biological Computing Group • Department of Computer Science • Rice University