The LabelHash Server

8tlnE motif

Motif residues: MET120 GLU143 LEU144 TYR157 HIS231

Table of Top 100 matches

Click here for a compact table with the top 100 matches.
The images below show the motif residues and the match residues superimposed. The carbon atoms are white in the motif and green in the match. Other atoms in the motif and match are colored by element. The C-alphas are shown as spheres, while the remaining motif and match atoms are shown in stick representation. The rest of the matching protein is shown in ribbon representation.

Downloads

Top 20 matches

For each match you can click on the "[pdb]" link to download a PDB file with the matching chain aligned with the motif.

1.  3tliA [pdb]

LRMSD: 0.186
p-value: 2.04e-05
Matching residues: MET120 GLU143 LEU144 TYR157 HIS231
EC class: 3.4.24.27
Biological process: proteolysis
Cellular Component: extracellular region
Molecular function: metalloendopeptidase activity, peptidase activity, metallopeptidase activity, zinc ion binding, hydrolase activity, metal ion binding


2.  1bqbA [pdb]

LRMSD: 0.235
p-value: 4.5e-05
Matching residues: MET122 GLU145 ILE146 TYR159 HIS228
EC class: 3.4.24.29
Biological process: proteolysis
Cellular Component: extracellular region
Molecular function: metalloendopeptidase activity, peptidase activity, metallopeptidase activity, zinc ion binding, hydrolase activity, metal ion binding


3.  2bh2B [pdb]

LRMSD: 0.417
p-value: 9.67e-05
Matching residues: SER117 MET416 LEU423 GLU424 LEU428
EC class: 0.0.0.0
Biological process: rRNA processing, RNA processing, rRNA methylation, rRNA base methylation
Molecular function: RNA binding, methyltransferase activity, RNA methyltransferase activity, transferase activity, metal ion binding, iron-sulfur cluster binding, 4 iron, 4 sulfur cluster binding


4.  1u4gA [pdb]

LRMSD: 0.458
p-value: 0.000134
Matching residues: MET120 GLU141 VAL142 TYR155 HIS223
EC class: 3.4.24.26
Biological process: proteolysis
Cellular Component: extracellular region
Molecular function: metalloendopeptidase activity, peptidase activity, metallopeptidase activity, zinc ion binding, hydrolase activity, metal ion binding


5.  3bjqH [pdb]

LRMSD: 0.469
p-value: 0.00014
Matching residues: LEU28 ALA119 LEU120 TYR266 HIS271
EC class: 0.0.0.0


6.  2pz9A [pdb]

LRMSD: 0.539
p-value: 0.000222
Matching residues: LEU89 LEU95 ILE175 ALA176 LEU205
EC class: 0.0.0.0
Biological process: regulation of transcription
Molecular function: DNA binding, sequence-specific DNA binding transcription factor activity, specific transcriptional repressor activity, transcription regulator activity


7.  2nn6B [pdb]

LRMSD: 0.545
p-value: 0.00023
Matching residues: LEU100 TYR134 LEU189 ILE195 ALA196
EC class: 0.0.0.0
Biological process: rRNA processing, RNA processing, immune response, rRNA processing, RNA processing, rRNA processing, RNA processing, rRNA processing, rRNA processing, rRNA processing, rRNA processing, RNA processing, histone mRNA catabolic process, rRNA processing, RNA processing, biological_process, rRNA processing, RNA processing, RNA catabolic process
Cellular Component: nuclear exosome (RNase complex), exosome (RNase complex), nucleus, nucleolus, cytoplasm, exosome (RNase complex), nucleus, nucleolus, cytoplasm, exosome (RNase complex), nucleus, nucleolus, cytoplasm, exosome (RNase complex), nucleus, nucleolus, nuclear exosome (RNase complex), cytoplasmic exosome (RNase complex), exosome (RNase complex), nucleus, nucleolus, cytoplasm, exosome (RNase complex), nucleus, nucleolus, cytoplasm, exosome (RNase complex), nucleus, nucleolus, cytoplasm, exosome (RNase complex), cellular_component, nucleus, nucleolus, cytoplasm, exosome (RNase complex), nucleus, nucleolus
Molecular function: 3'-5'-exoribonuclease activity, RNA binding, nuclease activity, exonuclease activity, protein binding, hydrolase activity, 3'-5'-exoribonuclease activity, RNA binding, nuclease activity, exonuclease activity, protein binding, hydrolase activity, 3'-5'-exoribonuclease activity, RNA binding, nuclease activity, exonuclease activity, hydrolase activity, RNA binding, nuclease activity, exonuclease activity, protein binding, hydrolase activity, 3'-5'-exoribonuclease activity, RNA binding, nuclease activity, exonuclease activity, protein binding, hydrolase activity, 3'-5'-exoribonuclease activity, RNA binding, nuclease activity, exonuclease activity, protein binding, 7S RNA binding, hydrolase activity, 3'-5'-exoribonuclease activity, RNA binding, nuclease activity, exonuclease activity, protein binding, hydrolase activity, 3'-5'-exoribonuclease activity, molecular_function, RNA binding, nuclease activity, exonuclease activity, protein binding, hydrolase activity, identical protein binding, 3'-5'-exoribonuclease activity, RNA binding, nuclease activity, exonuclease activity, protein binding, hydrolase activity


8.  3nqzB [pdb]

LRMSD: 0.566
p-value: 0.000259
Matching residues: MET325 GLU346 VAL347 TYR360 HIS428
EC class: 0.0.0.0
Biological process: proteolysis
Cellular Component: extracellular region
Molecular function: metalloendopeptidase activity, peptidase activity, metallopeptidase activity, zinc ion binding


9.  1x3fA [pdb]

LRMSD: 0.6
p-value: 0.000325
Matching residues: LEU13 SER35 LEU83 VAL99 GLU100
EC class: 0.0.0.0
Biological process: DNA replication, DNA repair, response to DNA damage stimulus
Molecular function: DNA binding, single-stranded DNA binding


10.  2we9A [pdb]

LRMSD: 0.635
p-value: 0.000443
Matching residues: LEU11 ALA13 LEU19 LEU26 LEU53
EC class: 0.0.0.0


11.  1hdsD [pdb]

LRMSD: 0.643
p-value: 0.000517
Matching residues: LEU80 LEU90 VAL136 ALA139 HIS145
EC class: 0.0.0.0
Biological process: transport, oxygen transport, transport, oxygen transport
Cellular Component: hemoglobin complex, hemoglobin complex
Molecular function: oxygen transporter activity, iron ion binding, oxygen binding, heme binding, metal ion binding, oxygen transporter activity, iron ion binding, oxygen binding, heme binding, metal ion binding


12.  1zcdA [pdb]

LRMSD: 0.649
p-value: 0.000517
Matching residues: ILE134 ALA135 LEU138 LEU255 LEU262
EC class: 0.0.0.0
Biological process: transport, ion transport, sodium ion transport, cellular sodium ion homeostasis, regulation of pH, proton transport
Cellular Component: plasma membrane, membrane, integral to membrane
Molecular function: antiporter activity, cation:cation antiporter activity


13.  1xbaA [pdb]

LRMSD: 0.651
p-value: 0.000562
Matching residues: LEU453 LEU495 ALA497 TYR507 LEU561
EC class: 2.7.10.2
Biological process: activation of MAPK activity, serotonin secretion, protein complex assembly, protein phosphorylation, leukocyte cell-cell adhesion, cell surface receptor linked signaling pathway, enzyme linked receptor protein signaling pathway, integrin-mediated signaling pathway, activation of JUN kinase activity, cell proliferation, organ morphogenesis, peptidyl-tyrosine phosphorylation, leukotriene biosynthetic process, neutrophil chemotaxis, positive regulation of mast cell degranulation, beta selection, interspecies interaction between organisms, positive regulation of interleukin-3 biosynthetic process, positive regulation of granulocyte macrophage colony-stimulating factor biosynthetic process, positive regulation of B cell differentiation, positive regulation of gamma-delta T cell differentiation, positive regulation of alpha-beta T cell differentiation, positive regulation of alpha-beta T cell proliferation, protein autophosphorylation, positive regulation of peptidyl-tyrosine phosphorylation, regulation of immune response, positive regulation of calcium-mediated signaling, B cell receptor signaling pathway
Cellular Component: cytoplasm, B cell receptor complex, T cell receptor complex
Molecular function: nucleotide binding, protein kinase activity, protein tyrosine kinase activity, non-membrane spanning protein tyrosine kinase activity, receptor signaling protein tyrosine kinase activity, integrin binding, protein binding, ATP binding, kinase activity, transferase activity, protein domain specific binding


14.  2arzB [pdb]

LRMSD: 0.652
p-value: 0.000562
Matching residues: LEU181 ALA182 LEU192 LEU208 TRP236
EC class: 0.0.0.0
Molecular function: FMN binding


15.  1m9lA [pdb]

LRMSD: 0.654
p-value: 0.000562
Matching residues: LEU108 LEU136 ALA137 LEU146 TYR153
EC class: 0.0.0.0
Cellular Component: cytoplasm, cytoskeleton, microtubule, cilium, flagellum, dynein complex, flagellar axoneme, cell projection
Molecular function: motor activity, protein binding


16.  2o5vA [pdb]

LRMSD: 0.669
p-value: 0.00066
Matching residues: LEU123 LEU200 LEU253 ALA281 LEU285
EC class: 0.0.0.0
Biological process: DNA replication, DNA repair, response to DNA damage stimulus, SOS response
Cellular Component: cytoplasm
Molecular function: nucleotide binding, DNA binding, single-stranded DNA binding, ATP binding, nucleoside-triphosphatase activity


17.  2wawA [pdb]

LRMSD: 0.674
p-value: 0.000717
Matching residues: LEU11 ALA13 LEU19 LEU26 LEU53
EC class: 0.0.0.0
Biological process: isoprenoid biosynthetic process
Molecular function: catalytic activity



19.  1dtzA [pdb]

LRMSD: 0.679
p-value: 0.000781
Matching residues: LEU63 GLU80 VAL81 LEU308 LEU320
EC class: 0.0.0.0
Biological process: transport, ion transport, iron ion transport, cellular iron ion homeostasis
Cellular Component: extracellular region
Molecular function: ferric iron binding, peptidase activity, serine-type peptidase activity, hydrolase activity, metal ion binding


20.  1ue6C [pdb]

LRMSD: 0.681
p-value: 0.000781
Matching residues: LEU13 SER35 LEU83 ILE99 GLU100
EC class: 0.0.0.0
Biological process: DNA replication, DNA repair, response to DNA damage stimulus, protein homotetramerization
Cellular Component: extracellular region, plasma membrane
Molecular function: DNA binding, single-stranded DNA binding